RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ZNF441Q8N8Z8 693 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 FNDC5Q8NAU1 212 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 OR4D6Q8NGJ1 314 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 OR9G4Q8NGQ1 327 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ANKRD7Q92527 254 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 SLC38A4Q969I6 547 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 RAB3CQ96E17 227 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 C17orf77Q96MU5 243 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 FAM218AQ96MZ4 157 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ZNF385AQ96PM9 386 aaKnown RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 IL4I1Q96RQ9 567 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 CYTH2Q99418 400 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 PELOQ9BRX2 385 aaKnown RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 APOBEC3GQ9HC16 384 aaKnown RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 C20orf96Q9NUD7 363 aaPredicted RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 GHRLQ9UBU3 117 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 RALYQ9UKM9 306 aaKnown RBP2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 PPIL1Q9Y3C6 166 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 NRXN2Q9P2S2 1712 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 PCNTO95613 3336 aa2.71□□□□□ -1.97
DEPDC1-204ENST00000489862 ABCC12Q96J65 1359 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 AFDNP55196 1824 aaKnown RBP2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 PXDNLA1KZ92 1463 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 MROH7-TTC4A0A0A0MT08 1334 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 MAP3K15Q6ZN16 1313 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 C10orf71Q711Q0 1435 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 NUP98P52948 1817 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 KIF13BQ9NQT8 1826 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 IGHV4OR15-8A0A075B7B6 117 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 A0A0J9YYE9 177 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 PCP4L1A6NKN8 68 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 SERPINE3A8MV23 424 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ERVV-1B6SEH8 477 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 AIREO43918 545 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 CAVIN2O95810 425 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 TRBC1P01850 177 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 HOXB7P09629 217 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC35G4P0C7Q5 338 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 NQO2P16083 231 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF23P17027 643 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF43P17038 809 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 AZU1P20160 251 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 KITLGP21583 273 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 CTNNA2P26232 953 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 AHRP35869 848 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 TAF6P49848 677 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 FUT6P51993 359 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ARHGDIBP52566 201 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 EFNB2P52799 333 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ACLYP53396 1101 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 HMGCS2P54868 508 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 TPM4P67936 248 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 RPL24P83731 157 aaKnown RBP2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 GUCY2DQ02846 1103 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 CDH17Q12864 832 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 GTF2H2Q13888 395 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 CRMP1Q14194 572 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 GRB14Q14449 540 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 GANABQ14697 944 aaKnown RBP2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ATXN7L3Q14CW9 347 aaPredicted RBP2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 TAF13Q15543 124 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 KNOP1Q1ED39 458 aaKnown RBP2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC25A52Q3SY17 297 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 SPANXN4Q5MJ08 99 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 GTF2H2CQ6P1K8 395 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ENPP6Q6UWR7 440 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 VITQ6UXI7 678 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 TMEM184AQ6ZMB5 413 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF852Q6ZMS4 543 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 PRSS48Q7RTY5 328 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 MICU2Q8IYU8 434 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC37A3Q8NCC5 494 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 OR4C5Q8NGB2 326 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 OR52E5Q8NH55 327 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ANGPTL6Q8NI99 470 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 PAQR8Q8TEZ7 354 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 MRGPRFQ96AM1 343 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 SLC47A1Q96FL8 570 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 CPB2Q96IY4 423 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 CAPNS2Q96L46 248 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF317Q96PQ6 595 aaPredicted RBP2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 PSD2Q9BQI7 771 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 DCTN5Q9BTE1 182 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 PARD6GQ9BYG4 376 aaPredicted RBP2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 GLIPR2Q9H4G4 154 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ANKRD19PQ9H560 264 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 C3orf14Q9HBI5 128 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 CCNB1IP1Q9NPC3 277 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 IL26Q9NPH9 171 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 MED17Q9NVC6 651 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 MS4A12Q9NXJ0 267 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 QPCTLQ9NXS2 382 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 SMARCAL1Q9NZC9 954 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 IL36AQ9UHA7 158 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ZNF229Q9UJW7 825 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 PDE10AQ9Y233 779 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 STARD10Q9Y365 291 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ATP6V1DQ9Y5K8 247 aa2.71□□□□□ -1.98
DEPDC1-204ENST00000489862 ARID2Q68CP9 1835 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms