RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CRY2Q49AN0 593 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 RNASE12Q5GAN4 147 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 RNASE10Q5GAN6 216 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SAPCD1Q5SSQ6 148 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 MARC1Q5VT66 337 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 LIPNQ5VXI9 398 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 C18orf63Q68DL7 685 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 CXorf57Q6NSI4 855 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 NOXRED1Q6NXP6 359 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 CDC73Q6P1J9 531 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 PGBD2Q6P3X8 592 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 MBOAT1Q6ZNC8 495 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 UBE2R2Q712K3 238 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SSX6Q7RTT6 188 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 MRGPREQ86SM8 312 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SP8Q8IXZ3 490 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 CLECL1Q8IZS7 167 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 LINC00471Q8N535 108 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 HJURPQ8NCD3 748 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 OR13C4Q8NGS5 318 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF417Q8TAU3 575 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 FCAMRQ8WWV6 532 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 PIGKQ92643 395 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 RFKQ969G6 155 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC25A36Q96CQ1 311 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 FBXO17Q96EF6 278 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 CCDC74BQ96LY2 380 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 FANCD2OSQ96PS1 177 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF587Q96SQ5 575 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 PCYT2Q99447 389 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 NRIP2Q9BQI9 281 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 PIGQQ9BRB3 760 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 TRIM62Q9BVG3 475 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 PINK1Q9BXM7 581 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 MVB12BQ9H7P6 319 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SFXN1Q9H9B4 322 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 BCO1Q9HAY6 547 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 MRPL17Q9NRX2 175 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ELOVL2Q9NXB9 296 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 RHCGQ9UBD6 479 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF282Q9UDV7 671 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 FBXL21Q9UKT6 434 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 AKT3Q9Y243 479 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 RCE1Q9Y256 329 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 EXOGQ9Y2C4 368 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 OARD1Q9Y530 152 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ARL5AQ9Y689 179 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SBF1O95248 1867 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ANKRD36A6QL64 1941 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 CHD5Q8TDI0 1954 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 A0A0G2JMZ2 1700 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 LRRC37A2A6NM11 1700 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 LRRC37AA6NMS7 1700 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 TSC2P49815 1807 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 TRAV14DV4A0A0A6YYC5 116 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 TRAV1-2A0A0B4J238 106 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ANKRD20A5PA0PJZ0 165 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 YJEFN3A6XGL0 299 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF705EA8MWA4 302 aaPredicted RBP4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 E7EQ34 232 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 GOSR2O14653 212 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF197O14709 1029 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 YY2O15391 372 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 TOX3O15405 576 aaPredicted RBP4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 B4GALT3O60512 393 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 UGDHO60701 494 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 MED6O75586 246 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 RAB3DO95716 219 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC25A27O95847 323 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 CD8AP01732 235 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ATP1B1P05026 303 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 VSIG10L2P0DP72 767 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 LAMP1P11279 417 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 NR2C1P13056 603 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 GSTM3P21266 225 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 TBXA2RP21731 343 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 MAS1LP35410 378 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 MAGEB1P43366 347 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 PCBP3P57721 371 aaKnown RBP4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 GABREP78334 506 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 HSD11B2P80365 405 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 MRPS10P82664 201 aaKnown RBP4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 CDK6Q00534 326 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 SEMG2Q02383 582 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 HGFACQ04756 655 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 TNFRSF9Q07011 255 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 SRSF4Q08170 494 aaKnown RBP4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM115Q12893 351 aaPredicted RBP4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ARHGEF7Q14155 803 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 USF2Q15853 346 aaPredicted RBP4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 C2orf68Q2NKX9 166 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF805Q5CZA5 627 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ENTPD8Q5MY95 495 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 CTSL3PQ5NE16 218 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 CPTPQ5TA50 214 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ARHGAP40Q5TG30 622 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 NSUN5P2Q63ZY6 315 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 GLT8D1Q68CQ7 371 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 OR10K2Q6IF99 312 aa4.4□□□□□ -1.7
SNRNP40-206ENST00000489853 ACSM5Q6NUN0 579 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms