RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 ZNF852Q6ZMS4 543 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 TBC1D20Q96BZ9 403 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 GON7Q9BXV9 100 aa16.42■□□□□ 0.22
NPHP4-209ENST00000489180 PRAMEF26H0Y7S4 382 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 M6PRP20645 277 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 APLNRP35414 380 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 IDUAP35475 653 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 PLK5Q496M5 336 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 FAM57BQ71RH2 274 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 BBS1Q8NFJ9 593 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 OR5K2Q8NHB8 316 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 LGALS14Q8TCE9 139 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 HAVCR2Q8TDQ0 301 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 UBE2FQ969M7 185 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 OR14A2Q96R54 314 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TNFRSF13CQ96RJ3 184 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 PRR14Q9BWN1 585 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 SLC38A1Q9H2H9 487 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 KLHL42Q9P2K6 505 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 CPNE7Q9UBL6 633 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 LILRB5O75023 590 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF28P17035 718 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 POLR2HP52434 150 aaKnown RBP16.41■□□□□ 0.22
NPHP4-209ENST00000489180 LPAL2Q16609 132 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TPRA1Q86W33 373 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 LRRC18Q8N456 261 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 GCM1Q9NP62 436 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 GPATCH2Q9NW75 528 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 ANKRD12Q6UB98 2062 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 CDHR4A6H8M9 788 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TXNL1O43396 289 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 MED6O75586 246 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 UBBP0CG47 229 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 UBCP0CG48 685 aaKnown RBP16.41■□□□□ 0.22
NPHP4-209ENST00000489180 GDNFP39905 211 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 SLC14A1Q13336 389 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 GGTA1PQ4G0N0 100 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 HACD4Q5VWC8 232 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 UNQ6126/PRO20091Q6UXV3 157 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 HAS2Q92819 552 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 NICN1Q9BSH3 213 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 CXorf36Q9H7Y0 433 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 UGT2A1Q9Y4X1 527 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 SNX11Q9Y5W9 270 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 FADS1O60427 444 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TPPPO94811 219 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 GPR75O95800 540 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 SERPINA7P05543 415 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 RPE65Q16518 533 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 FUNDC1Q8IVP5 155 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 NANOS1Q8WY41 292 aaKnown RBP16.41■□□□□ 0.22
NPHP4-209ENST00000489180 SORCS2Q96PQ0 1159 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 ACSS1Q9NUB1 689 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-209ENST00000489180 PCDHGA1Q9Y5H4 931 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TRBV11-1A0A0K0K1C0 115 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TMEM72A0PK05 275 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 FOXE1O00358 373 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-209ENST00000489180 CD53P19397 219 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 PRKAR1BP31321 381 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 OPRD1P41143 372 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 VEGFCP49767 419 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 ACY1Q03154 408 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TUBB3Q13509 450 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF750Q32MQ0 723 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 PELI3Q8N2H9 469 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF740Q8NDX6 193 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 SEC22AQ96IW7 307 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 HHATLQ9HCP6 504 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 MED16Q9Y2X0 877 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 ATG4BQ9Y4P1 393 aa16.41■□□□□ 0.22
NPHP4-209ENST00000489180 TAPBPO15533 448 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 FABP7O15540 132 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 LAMTOR5O43504 91 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 GMDSO60547 372 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 SEC14L2O76054 403 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 TIMP1P01033 207 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 CHRM4P08173 479 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 RPS2P15880 293 aaKnown RBP16.4■□□□□ 0.22
NPHP4-209ENST00000489180 PRDX1Q06830 199 aaKnown RBP16.4■□□□□ 0.22
NPHP4-209ENST00000489180 MPP7Q5T2T1 576 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 FBXW12Q6X9E4 464 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 SLC46A3Q7Z3Q1 461 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 TM9SF4Q92544 642 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 GHSRQ92847 366 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 TOE1Q96GM8 510 aaKnown RBP16.4■□□□□ 0.22
NPHP4-209ENST00000489180 KATNB1Q9BVA0 655 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 SCML1Q9UN30 329 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 PDE4DIPQ5VU43 2346 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 A6NL46 340 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 ACTL6BO94805 426 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 OR1D4P47884 311 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 FAM111BQ6SJ93 734 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 SULT1C2O00338 296 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 ZNF593O00488 134 aaPredicted RBP16.4■□□□□ 0.22
NPHP4-209ENST00000489180 PCSK6P29122 969 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 SSX2Q16385 188 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 TMEM255BQ8WV15 326 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 A0A0B4J2A0 478 aa16.4■□□□□ 0.22
NPHP4-209ENST00000489180 PIGBOS1A0A0B4J2F0 54 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms