RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 DSTNP60981 165 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 ZSWIM7Q19AV6 140 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 C6orf10Q5SRN2 563 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 NCMAPQ5T1S8 102 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 ALKBH2Q6NS38 261 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 ZNF836Q6ZNA1 936 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 SSX8Q7RTT4 187 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.1□□□□□ -0.63
SRRM1-216ENST00000489130 VRK2Q86Y07 508 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 ZNF100Q8IYN0 542 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 OR52P1PQ8NH57 321 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 AKAP1Q92667 903 aaKnown RBP eCLIP11.1□□□□□ -0.63
SRRM1-216ENST00000489130 DNAJA3Q96EY1 480 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 PERPQ96FX8 193 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 ATP6V1G3Q96LB4 118 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 PAIP1Q9H074 479 aaKnown RBP11.1□□□□□ -0.63
SRRM1-216ENST00000489130 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-216ENST00000489130 ESRP2Q9H6T0 727 aaKnown RBP11.1□□□□□ -0.63
SRRM1-216ENST00000489130 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 TCF7L2Q9NQB0 619 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 ZNF443Q9Y2A4 671 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-216ENST00000489130 RNF115Q9Y4L5 304 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 PCDHB14Q9Y5E9 798 aa11.1□□□□□ -0.63
SRRM1-216ENST00000489130 FLNAP21333 2647 aaKnown RBP11.1□□□□□ -0.63
SRRM1-216ENST00000489130 SETD2Q9BYW2 2564 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-216ENST00000489130 A0A0G2JPF8 293 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 ZC3H12DA2A288 527 aaKnown RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 HNRNPCL2B2RXH8 293 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 HNRNPCL3B7ZW38 293 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 POLR3GO15318 223 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 HNRNPCL1O60812 293 aaKnown RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 PGM3O95394 542 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 INHBBP09529 407 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 GKN3PP0CG01 181 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 HNRNPCL4P0DMR1 293 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 IMPDH2P12268 514 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 BMP2P12643 396 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 CCNA2P20248 432 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 NTF4P34130 210 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 ACAA2P42765 397 aaKnown RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 PTH2RP49190 550 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 STX1BP61266 288 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 SLC35A1P78382 337 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 FADDQ13158 208 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 RGNQ15493 299 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 KRTAP21-3Q3LHN1 58 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 TTMPQ5BVD1 217 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 RPS26P11Q5JNZ5 115 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 TIMM23BQ5SRD1 257 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 PRAMEF8Q5VWM4 474 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 PRAMEF7Q5VXH5 474 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 FBXW9Q5XUX1 488 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 SLC2A7Q6PXP3 512 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 YTHDF3Q7Z739 585 aaKnown RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 BIVMQ86UB2 503 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 P2RY8Q86VZ1 359 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 CCDC103Q8IW40 242 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 LILRB1Q8NHL6 650 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 LRRC8CQ8TDW0 803 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 TMEM171Q8WVE6 324 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 APH1AQ96BI3 265 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 POM121Q96HA1 1249 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 TMEM19Q96HH6 336 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 EBF4Q9BQW3 602 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 CXorf56Q9H5V9 222 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 A4GALTQ9NPC4 353 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 ZNF701Q9NV72 531 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 MALT1Q9UDY8 824 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 NOSIPQ9Y314 301 aaKnown RBP11.09□□□□□ -0.63
SRRM1-216ENST00000489130 CHST2Q9Y4C5 530 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 ACANP16112 2415 aa11.09□□□□□ -0.63
SRRM1-216ENST00000489130 A0A096LPI6 279 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 TMEM247A6NEH6 219 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 OR5H1A6NKK0 313 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 CLIC1O00299 241 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 CD3EP07766 207 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 GGT1P19440 569 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 IDH3AP50213 366 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 BSPH1Q075Z2 132 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 CAPRIN1Q14444 709 aaKnown RBP11.08□□□□□ -0.64
SRRM1-216ENST00000489130 LARS2Q15031 903 aaKnown RBP11.08□□□□□ -0.64
SRRM1-216ENST00000489130 PPA1Q15181 289 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 STK11Q15831 433 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 LRIF1Q5T3J3 769 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 WBP2NLQ6ICG8 309 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 BLOC1S3Q6QNY0 202 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 PAQR6Q6TCH4 344 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 ATG4DQ86TL0 474 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-216ENST00000489130 LSRQ86X29 649 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-216ENST00000489130 FUNDC1Q8IVP5 155 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 CLIP4Q8N3C7 705 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 ZNF433Q8N7K0 673 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-216ENST00000489130 COX4I2Q96KJ9 171 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 Q96MF0 132 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 NAA11Q9BSU3 229 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-216ENST00000489130 CCDC28BQ9BUN5 200 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 SPATA9Q9BWV2 254 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 RAD21L1Q9H4I0 556 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 BCL2L10Q9HD36 194 aa11.08□□□□□ -0.64
SRRM1-216ENST00000489130 TAS2R16Q9NYV7 291 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms