RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 AWAT1Q58HT5 328 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 CLEC6AQ6EIG7 209 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 OLIG3Q7RTU3 272 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 ADGRG3Q86Y34 549 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 OR7A2PQ8NGA2 310 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 OR5D16Q8NGK9 328 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 OR2T11Q8NH01 316 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 TMEM186Q96B77 213 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 MTERF3Q96E29 417 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 NMUR2Q9GZQ4 415 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 LPAR2Q9HBW0 351 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 TMEM181Q9P2C4 612 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 TRAPPC4Q9Y296 219 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 SPEF1Q9Y4P9 236 aa14.02□□□□□ -0.17
USP48-210ENST00000489108 TMEM129A0AVI4 362 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 FCMRO60667 390 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 SKAP2O75563 359 aaPredicted RBP14.01□□□□□ -0.17
USP48-210ENST00000489108 URI1O94763 535 aaPredicted RBP14.01□□□□□ -0.17
USP48-210ENST00000489108 KRT16P08779 473 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 DDX5P17844 614 aaKnown RBP14.01□□□□□ -0.17
USP48-210ENST00000489108 RYKP34925 604 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 THBS4P35443 961 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 ASMTP46597 345 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 RPL38P63173 70 aaKnown RBP14.01□□□□□ -0.17
USP48-210ENST00000489108 HGFACQ04756 655 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 SCGB2A2Q13296 93 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 SLC17A1Q14916 467 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 TBRG1Q3YBR2 411 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 SPDYE7PQ495Y7 208 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 SHQ1Q6PI26 577 aaKnown RBP14.01□□□□□ -0.17
USP48-210ENST00000489108 FRMD7Q6ZUT3 714 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 USP43Q70EL4 1123 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 LCA5Q86VQ0 697 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 OR56A1Q8NGH5 318 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 ZNF563Q8TA94 476 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 BOD1Q96IK1 185 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 ZNF696Q9H7X3 374 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 SEC61A2Q9H9S3 476 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 OBP2BQ9NPH6 170 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 ATP6V1HQ9UI12 483 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 FBXO9Q9UK97 447 aaPredicted RBP14.01□□□□□ -0.17
USP48-210ENST00000489108 MKLN1Q9UL63 735 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 PCDHGB1Q9Y5G3 927 aa14.01□□□□□ -0.17
USP48-210ENST00000489108 G3V2L1 256 aa14□□□□□ -0.17
USP48-210ENST00000489108 H3BQF6 201 aa14□□□□□ -0.17
USP48-210ENST00000489108 NR5A2O00482 541 aa14□□□□□ -0.17
USP48-210ENST00000489108 ANKRD28O15084 1053 aa14□□□□□ -0.17
USP48-210ENST00000489108 BCAS1O75363 584 aaPredicted RBP14□□□□□ -0.17
USP48-210ENST00000489108 UGT2B17O75795 530 aa14□□□□□ -0.17
USP48-210ENST00000489108 CECR9P0C854 216 aa14□□□□□ -0.17
USP48-210ENST00000489108 LAMP1P11279 417 aa14□□□□□ -0.17
USP48-210ENST00000489108 NPR2P20594 1047 aa14□□□□□ -0.17
USP48-210ENST00000489108 CLK1P49759 484 aaKnown RBP14□□□□□ -0.17
USP48-210ENST00000489108 KHKP50053 298 aa14□□□□□ -0.17
USP48-210ENST00000489108 ARFIP2P53365 341 aa14□□□□□ -0.17
USP48-210ENST00000489108 TUBA1BP68363 451 aa14□□□□□ -0.17
USP48-210ENST00000489108 TUBA4AP68366 448 aa14□□□□□ -0.17
USP48-210ENST00000489108 TUBA1AQ71U36 451 aa14□□□□□ -0.17
USP48-210ENST00000489108 EIF3MQ7L2H7 374 aaKnown RBP14□□□□□ -0.17
USP48-210ENST00000489108 AAED1Q7RTV5 226 aa14□□□□□ -0.17
USP48-210ENST00000489108 SPATA21Q7Z572 469 aa14□□□□□ -0.17
USP48-210ENST00000489108 R3HCC1LQ7Z5L2 792 aaKnown RBP14□□□□□ -0.17
USP48-210ENST00000489108 CARM1Q86X55 608 aa14□□□□□ -0.17
USP48-210ENST00000489108 ZIC4Q8N9L1 334 aa14□□□□□ -0.17
USP48-210ENST00000489108 OR4F15Q8NGB8 312 aa14□□□□□ -0.17
USP48-210ENST00000489108 PSMA8Q8TAA3 256 aa14□□□□□ -0.17
USP48-210ENST00000489108 OR5P2Q8WZ92 322 aa14□□□□□ -0.17
USP48-210ENST00000489108 AURKBQ96GD4 344 aaPredicted RBP14□□□□□ -0.17
USP48-210ENST00000489108 LRRC37BQ96QE4 947 aa14□□□□□ -0.17
USP48-210ENST00000489108 NAA11Q9BSU3 229 aaPredicted RBP14□□□□□ -0.17
USP48-210ENST00000489108 NARFLQ9H6Q4 476 aa14□□□□□ -0.17
USP48-210ENST00000489108 TMEM45AQ9NWC5 275 aa14□□□□□ -0.17
USP48-210ENST00000489108 USP22Q9UPT9 525 aa14□□□□□ -0.17
USP48-210ENST00000489108 GRIP1Q9Y3R0 1128 aa14□□□□□ -0.17
USP48-210ENST00000489108 EIF1BO60739 113 aaKnown RBP13.99□□□□□ -0.17
USP48-210ENST00000489108 C6orf47O95873 294 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 LGI1O95970 557 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 ADRA2AP08913 450 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 MYL2P10916 166 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 IMPDH2P12268 514 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 BCKDHAP12694 445 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 EPHA1P21709 976 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 FKBP2P26885 142 aaKnown RBP13.99□□□□□ -0.17
USP48-210ENST00000489108 GCAP28676 217 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 PGM1P36871 562 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 RPS26P62854 115 aaKnown RBP13.99□□□□□ -0.17
USP48-210ENST00000489108 SLC35A1P78382 337 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 IL1RL1Q01638 556 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 MAPK14Q16539 360 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 LIPMQ5VYY2 423 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 C1orf229Q6ZS94 237 aaPredicted RBP13.99□□□□□ -0.17
USP48-210ENST00000489108 GRINAQ7Z429 371 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 POMGNT2Q8NAT1 580 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 NUP37Q8NFH4 326 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 OR1K1Q8NGR3 316 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 OR5AK3PQ8NH89 298 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 CLDND2Q8NHS1 167 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 TMEM45BQ96B21 275 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 CCDC126Q96EE4 140 aa13.99□□□□□ -0.17
USP48-210ENST00000489108 ZNF385AQ96PM9 386 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms