RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 P2RX2Q9UBL9 471 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 LAMP3Q9UQV4 416 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 TRAPPC4Q9Y296 219 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 USH1CQ9Y6N9 552 aa10.55□□□□□ -0.72
CCHCR1-215ENST00000488920 ZC3H12DA2A288 527 aaKnown RBP10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 FAM234BA2RU67 622 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 CDHR4A6H8M9 788 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF208O43345 1280 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 BCHEP06276 602 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 ZCCHC18P0CG32 403 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 IMPDH2P12268 514 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 GGT1P19440 569 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 MAGEA8P43361 318 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 DSTNP60981 165 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 SLC35A1P78382 337 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 LTBQ06643 244 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 BSPH1Q075Z2 132 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 PPA1Q15181 289 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 RPS26P11Q5JNZ5 115 aaPredicted RBP10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 FBXW9Q5XUX1 488 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 ADAM5Q6NVV9 412 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 SLC2A7Q6PXP3 512 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 SEZ6L2Q6UXD5 910 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 HEATR5AQ86XA9 2040 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 CLIP4Q8N3C7 705 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 CADM2Q8N3J6 435 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF433Q8N7K0 673 aaPredicted RBP10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 PIGXQ8TBF5 258 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 APH1AQ96BI3 265 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 DDIT4LQ96D03 193 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 MUCL1Q96DR8 90 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 BDH2Q9BUT1 245 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 ADAM19Q9H013 955 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 CXorf56Q9H5V9 222 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF701Q9NV72 531 aaPredicted RBP10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 CALML5Q9NZT1 146 aa10.54□□□□□ -0.72
CCHCR1-215ENST00000488920 ROS1P08922 2347 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 CIB4A0PJX0 185 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 CCT8L1PA6NM43 557 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 FAAHO00519 579 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 GPR171O14626 319 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 DNPH1O43598 174 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 MRPL33O75394 65 aaKnown RBP10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 RAD51DO75771 328 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 CNOT4O95628 575 aaKnown RBP10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 LY6G6DO95868 133 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 SOD3P08294 240 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 NUDT7P0C024 238 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 PRG2P13727 222 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 UQCRBP14927 111 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 PAX1P15863 534 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 COX5AP20674 150 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 CXCR1P25024 350 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 ACAA2P42765 397 aaKnown RBP10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 IDH3AP50213 366 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 SLC16A1P53985 500 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 CRISP3P54108 245 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 ATP5J2P56134 94 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 H3F3AP84243 136 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF672Q499Z4 452 aaPredicted RBP10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 LIN52Q52LA3 116 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 TIMM23BQ5SRD1 257 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 AGBL2Q5U5Z8 902 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF836Q6ZNA1 936 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 MSANTD1Q6ZTZ1 278 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF440Q8IYI8 595 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 KBTBD8Q8NFY9 601 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 SMAP2Q8WU79 429 aaPredicted RBP10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 GTF2H4Q92759 462 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 COX4I2Q96KJ9 171 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 NAA11Q9BSU3 229 aaPredicted RBP10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 PAIP1Q9H074 479 aaKnown RBP10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 SLCO1B3Q9NPD5 702 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF232Q9UNY5 417 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 ZNF443Q9Y2A4 671 aaPredicted RBP10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 PCDHB14Q9Y5E9 798 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 DSPPQ9NZW4 1301 aa10.53□□□□□ -0.72
CCHCR1-215ENST00000488920 PRR14LQ5THK1 2151 aa10.52□□□□□ -0.72
CCHCR1-215ENST00000488920 A0A0G2JPF8 293 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 A0A1W2PR80 420 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 OR5H1A6NKK0 313 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 HNRNPCL2B2RXH8 293 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 HNRNPCL3B7ZW38 293 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 CLIC1O00299 241 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 EIF1BO60739 113 aaKnown RBP10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 HNRNPCL1O60812 293 aaKnown RBP10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 PGM3O95394 542 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 HNRNPCL4P0DMR1 293 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 MAP2K6P52564 334 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 FOXG1P55316 489 aaPredicted RBP10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 RPS4XP62701 263 aaKnown RBP10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 FAPQ12884 760 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 BNIP2Q12982 314 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 CEACAM7Q14002 265 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 LARS2Q15031 903 aaKnown RBP10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 RGNQ15493 299 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 CASP12Q6UXS9 341 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 P2RY8Q86VZ1 359 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 OR52E4Q8NGH9 312 aa10.52□□□□□ -0.73
CCHCR1-215ENST00000488920 OR52N5Q8NH56 324 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms