RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CASP12Q6UXS9 341 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 ADGRG3Q86Y34 549 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 CCDC103Q8IW40 242 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 FBXL14Q8N1E6 418 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 MUC15Q8N387 334 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 OR52E4Q8NGH9 312 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 ZG16BQ96DA0 208 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 SLC35A5Q9BS91 424 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-231ENST00000488905 TMEM181Q9P2C4 612 aa16.19■□□□□ 0.18
HDAC6-231ENST00000488905 MARCOQ9UEW3 520 aaPredicted RBP16.19■□□□□ 0.18
HDAC6-231ENST00000488905 PRAMEF27A3QJZ7 478 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 A8MV72 311 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-231ENST00000488905 M0R1B8 84 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 HMGN4O00479 90 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 IFNA2P01563 188 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 MYZAPP0CAP1 466 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 CCNA2P20248 432 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 HTR3AP46098 478 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 IDH2P48735 452 aaKnown RBP16.18■□□□□ 0.18
HDAC6-231ENST00000488905 CLNS1AP54105 237 aaKnown RBP16.18■□□□□ 0.18
HDAC6-231ENST00000488905 OR2B6P58173 313 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 ABCE1P61221 599 aaKnown RBP16.18■□□□□ 0.18
HDAC6-231ENST00000488905 H3F3AP84243 136 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 C6orf52Q5T4I8 152 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 PODNL1Q6PEZ8 512 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 LSRQ86X29 649 aaPredicted RBP16.18■□□□□ 0.18
HDAC6-231ENST00000488905 OR10H5Q8NGA6 315 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 MUS81Q96NY9 551 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 AMBRA1Q9C0C7 1298 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 SLC9A8Q9Y2E8 581 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 RAP2CQ9Y3L5 183 aa16.18■□□□□ 0.18
HDAC6-231ENST00000488905 FAM234BA2RU67 622 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 WDR91A4D1P6 747 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 E9PBE3 544 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 H7C417 338 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 PDLIM1O00151 329 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 AP3D1O14617 1153 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 GPRIN2O60269 458 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 DSCR9P59020 149 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 FAM174BQ3ZCQ3 159 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 CHRFAM7AQ494W8 412 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 CMIPQ8IY22 773 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 DEPDC4Q8N2C3 294 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 C1orf162Q8NEQ5 155 aaPredicted RBP16.17■□□□□ 0.18
HDAC6-231ENST00000488905 AENQ8WTP8 325 aaKnown RBP16.17■□□□□ 0.18
HDAC6-231ENST00000488905 CNOT9Q92600 299 aaKnown RBP16.17■□□□□ 0.18
HDAC6-231ENST00000488905 HTRA1Q92743 480 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 DDIT4LQ96D03 193 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 INPP5KQ9BT40 448 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 C20orf27Q9GZN8 174 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 DCTN4Q9UJW0 460 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 TRAPPC4Q9Y296 219 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 FLVCR1Q9Y5Y0 555 aa16.17■□□□□ 0.18
HDAC6-231ENST00000488905 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.16■□□□□ 0.18
HDAC6-231ENST00000488905 TMED7-TICAM2A0A0A6YYA0 188 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 TMEM72A0PK05 275 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 ELOA3DA6NLF2 546 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-231ENST00000488905 RNF212BA8MTL3 300 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 ZNF208O43345 1280 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 EIF1BO60739 113 aaKnown RBP16.16■□□□□ 0.18
HDAC6-231ENST00000488905 C1QCP02747 245 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 CHRM4P08173 479 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 RPL14P50914 215 aaKnown RBP16.16■□□□□ 0.18
HDAC6-231ENST00000488905 FABP6P51161 128 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 POLR2HP52434 150 aaKnown RBP16.16■□□□□ 0.18
HDAC6-231ENST00000488905 SLC35A1P78382 337 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 RAB35Q15286 201 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 TMEM249Q2WGJ8 235 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 ELOA3BQ3SY89 546 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 C9orf135Q5VTT2 229 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 ZNF544Q6NX49 715 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 RNF130Q86XS8 419 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 LRRC34Q8IZ02 419 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 C17orf78Q8N4C9 275 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 ZNF525Q8N782 197 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 ELOA3Q8NG57 546 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 CCDC115Q96NT0 180 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 TRNT1Q96Q11 434 aaKnown RBP16.16■□□□□ 0.18
HDAC6-231ENST00000488905 SORT1Q99523 831 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 NUF2Q9BZD4 464 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 SLC38A1Q9H2H9 487 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 UPB1Q9UBR1 384 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 OSGIN1Q9UJX0 560 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 AMDHD2Q9Y303 409 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 TMED7Q9Y3B3 224 aa16.16■□□□□ 0.18
HDAC6-231ENST00000488905 AGAP5A6NIR3 686 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 BIRC5O15392 142 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 SNUPNO95149 360 aaKnown RBP16.15■□□□□ 0.18
HDAC6-231ENST00000488905 IMPDH2P12268 514 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 SLC25A16P16260 332 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 LBPP18428 481 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 RPS4Y1P22090 263 aaKnown RBP16.15■□□□□ 0.18
HDAC6-231ENST00000488905 SLC25A3Q00325 362 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 LOXL1Q08397 574 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-231ENST00000488905 SLC17A1Q14916 467 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 SYPL1Q16563 259 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 KIRREL3Q8IZU9 778 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 ANKFN1Q8N957 763 aa16.15■□□□□ 0.18
HDAC6-231ENST00000488905 WDR31Q8NA23 367 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms