RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 P2RX2Q9UBL9 471 aa11.54□□□□□ -0.56
ATPAF2-207ENST00000488753 MALT1Q9UDY8 824 aa11.54□□□□□ -0.56
ATPAF2-207ENST00000488753 OSGIN1Q9UJX0 560 aa11.54□□□□□ -0.56
ATPAF2-207ENST00000488753 TMED7Q9Y3B3 224 aa11.54□□□□□ -0.56
ATPAF2-207ENST00000488753 FN1P02751 2386 aaKnown RBP11.54□□□□□ -0.56
ATPAF2-207ENST00000488753 USF3Q68DE3 2245 aa11.54□□□□□ -0.56
ATPAF2-207ENST00000488753 PRR14LQ5THK1 2151 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 CFAP73A6NFT4 308 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 AP3D1O14617 1153 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 SMAD7O15105 426 aaKnown RBP11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 MRPL33O75394 65 aaKnown RBP11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 SLC22A3O75751 556 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 C1QCP02747 245 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 SOD3P08294 240 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 ZCCHC18P0CG32 403 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 IL7RP16871 459 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 SLC35A1P78382 337 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 EPS8Q12929 822 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 ZSWIM7Q19AV6 140 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 COX20Q5RI15 118 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 MRPL2Q5T653 305 aaKnown RBP11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 HMGN2P46Q86SG4 172 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 ATG4DQ86TL0 474 aaPredicted RBP11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 UBE2J2Q8N2K1 259 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 NAA11Q9BSU3 229 aaPredicted RBP11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 OR11A1Q9GZK7 315 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 ADAM19Q9H013 955 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 RMND5AQ9H871 391 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 MANSC1Q9H8J5 431 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 SDR39U1Q9NRG7 319 aaPredicted RBP11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 FAIMQ9NVQ4 179 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 PARPBPQ9NWS1 579 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 THUMPD1Q9NXG2 353 aaKnown RBP11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 NKIRAS1Q9NYS0 192 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 TAS2R16Q9NYV7 291 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 ZIM2Q9NZV7 527 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 SLC9A8Q9Y2E8 581 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 DSPPQ9NZW4 1301 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 CSPG4Q6UVK1 2322 aa11.53□□□□□ -0.56
ATPAF2-207ENST00000488753 FREM1Q5H8C1 2179 aa11.52□□□□□ -0.56
ATPAF2-207ENST00000488753 A0A1W2PP18 115 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 CIB4A0PJX0 185 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 CDHR4A6H8M9 788 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 KLF11O14901 512 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 GSNP06396 782 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 THBS1P07996 1170 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 PTAFRP25105 342 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 TACR3P29371 465 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 MVDP53602 400 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 OR2B6P58173 313 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 PGGHGQ32M88 737 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 LIN52Q52LA3 116 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 OR7E24Q6IFN5 339 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 PAQR6Q6TCH4 344 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 TMEM108Q6UXF1 575 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 DTX2Q86UW9 622 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 KBTBD8Q8NFY9 601 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 GTPBP3Q969Y2 492 aaKnown RBP11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 ITCHQ96J02 903 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 MUS81Q96NY9 551 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 ALG2Q9H553 416 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 PIF1Q9H611 641 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 TMBIM4Q9HC24 238 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 CISD1Q9NZ45 108 aaKnown RBP11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 MGAT4BQ9UQ53 548 aa11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 MAGED1Q9Y5V3 778 aaPredicted RBP11.52□□□□□ -0.57
ATPAF2-207ENST00000488753 TLN2Q9Y4G6 2542 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 TMEM72A0PK05 275 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 CCT8L1PA6NM43 557 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 SHISA9B4DS77 424 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 PDLIM1O00151 329 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 ABCD4O14678 606 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 RAD51DO75771 328 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 IGHV3-9P01782 118 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 KITP10721 976 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 IMPDH2P12268 514 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 CCNA2P20248 432 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 NTF4P34130 210 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 IDUAP35475 653 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 CRISP3P54108 245 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 TNK1Q13470 666 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 SLC17A1Q14916 467 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 MAPK11Q15759 364 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 CLEC12BQ2HXU8 276 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 RNF220Q5VTB9 566 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 NXNQ6DKJ4 435 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 KLHL17Q6TDP4 642 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 CCDC103Q8IW40 242 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 C17orf78Q8N4C9 275 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 C1orf162Q8NEQ5 155 aaPredicted RBP11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 OR52P1PQ8NH57 321 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 PNPT1Q8TCS8 783 aaKnown RBP11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 MGARPQ8TDB4 240 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 NEUROG1Q92886 237 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 TLCD1Q96CP7 247 aa11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 TRAF4Q9BUZ4 470 aaPredicted RBP11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 SF3B5Q9BWJ5 86 aaKnown RBP11.51□□□□□ -0.57
ATPAF2-207ENST00000488753 AMBRA1Q9C0C7 1298 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms