RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ANGPT2O15123 496 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 DNPH1O43598 174 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 NPIPB7O75200 414 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 HRGP04196 525 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 THBDP07204 575 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 PRKAR1BP31321 381 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 NTF4P34130 210 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 MAP2K6P52564 334 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 MTPNP58546 118 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 HOXC5Q00444 222 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 SCARB2Q14108 478 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 PDK3Q15120 406 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 TESK1Q15569 626 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 GLIPR1L2Q4G1C9 344 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 WBP2NLQ6ICG8 309 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 CDH24Q86UP0 819 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 TMEM200AQ86VY9 491 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 CDC20BQ86Y33 519 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 GABRG1Q8N1C3 465 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 C3orf49Q96BT1 292 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 DNAJA3Q96EY1 480 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 REXO5Q96IC2 774 aaKnown RBP12.62□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF300Q96RE9 604 aaPredicted RBP12.62□□□□□ -0.39
COL9A2-208ENST00000488463 SLC39A3Q9BRY0 314 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 NSRP1Q9H0G5 558 aaKnown RBP12.62□□□□□ -0.39
COL9A2-208ENST00000488463 CLEC4MQ9H2X3 399 aaPredicted RBP12.62□□□□□ -0.39
COL9A2-208ENST00000488463 LIME1Q9H400 295 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 C12orf49Q9H741 205 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 KLHL14Q9P2G3 628 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 CORO2BQ9UQ03 480 aa12.62□□□□□ -0.39
COL9A2-208ENST00000488463 SPIN1Q9Y657 262 aaPredicted RBP12.62□□□□□ -0.39
COL9A2-208ENST00000488463 PLCE1Q9P212 2302 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 DEFB108AA8MXU0 73 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 TMEM229AB2RXF0 380 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 C5orf58C9J3I9 102 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 C16orf97H3BN30 126 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 TPST2O60704 377 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 GOSR1O95249 250 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 TFPIP10646 304 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 CCNA2P20248 432 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 HTR2AP28223 471 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 LOXP28300 417 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-208ENST00000488463 SLC16A1P53985 500 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 CSNK2A1P68400 391 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-208ENST00000488463 DMTNQ08495 405 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 RASGEF1BQ0VAM2 473 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 NFYCQ13952 458 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 CAPRIN1Q14444 709 aaKnown RBP12.61□□□□□ -0.39
COL9A2-208ENST00000488463 EXOC3L2Q2M3D2 409 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 TRMT5Q32P41 509 aaKnown RBP12.61□□□□□ -0.39
COL9A2-208ENST00000488463 COQ5Q5HYK3 327 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 NANOGP8Q6NSW7 305 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF550Q7Z398 422 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 ATG4DQ86TL0 474 aaPredicted RBP12.61□□□□□ -0.39
COL9A2-208ENST00000488463 HIPK4Q8NE63 616 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 POLDIP3Q9BY77 421 aaKnown RBP12.61□□□□□ -0.39
COL9A2-208ENST00000488463 POTEKPQ9BYX7 375 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 PLEKHF2Q9H8W4 249 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 NANOGQ9H9S0 305 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 KLHL28Q9NXS3 571 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 TMEM181Q9P2C4 612 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 KLHL9Q9P2J3 617 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 NF1P21359 2839 aa12.61□□□□□ -0.39
COL9A2-208ENST00000488463 ALPK2Q86TB3 2170 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 FZD7O75084 574 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 MFN2O95140 757 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 UQCRBP14927 111 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 PSMB1P20618 241 aaKnown RBP12.6□□□□□ -0.39
COL9A2-208ENST00000488463 CRYGSP22914 178 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 SLC6A2P23975 617 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 DNAJA1P31689 397 aaKnown RBP12.6□□□□□ -0.39
COL9A2-208ENST00000488463 OR3A2P47893 321 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 KCNJ5P48544 419 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 CRYBA2P53672 197 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 GNGT1P63211 74 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 EGR4Q05215 589 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 RBBP4Q09028 425 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 BNIP2Q12982 314 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 TMEM201Q5SNT2 666 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 ANKRD34AQ69YU3 496 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 C6orf89Q6UWU4 347 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 BEND4Q6ZU67 534 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 CALHM3Q86XJ0 350 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 CCDC103Q8IW40 242 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 CADM2Q8N3J6 435 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 LSMEM1Q8N8F7 131 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 ZNF775Q96BV0 537 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-208ENST00000488463 TACO1Q9BSH4 297 aaKnown RBP12.6□□□□□ -0.39
COL9A2-208ENST00000488463 NDRG3Q9UGV2 375 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 RAI1Q7Z5J4 1906 aaPredicted RBP12.6□□□□□ -0.39
COL9A2-208ENST00000488463 ZANQ9Y493 2812 aa12.6□□□□□ -0.39
COL9A2-208ENST00000488463 GMNCA6NCL1 334 aa12.59□□□□□ -0.39
COL9A2-208ENST00000488463 LIPT2A6NK58 231 aa12.59□□□□□ -0.39
COL9A2-208ENST00000488463 AQP1P29972 269 aa12.59□□□□□ -0.39
COL9A2-208ENST00000488463 ADSLP30566 484 aaPredicted RBP12.59□□□□□ -0.39
COL9A2-208ENST00000488463 P2RY4P51582 365 aa12.59□□□□□ -0.39
COL9A2-208ENST00000488463 RABL3Q5HYI8 236 aa12.59□□□□□ -0.39
COL9A2-208ENST00000488463 REP15Q6BDI9 236 aa12.59□□□□□ -0.39
COL9A2-208ENST00000488463 SNX32Q86XE0 403 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms