RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NT5C3AQ9H0P0 336 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 TRPV5Q9NQA5 729 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 MIEF1Q9NQG6 463 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 ABCB10Q9NRK6 738 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 DCAF13Q9NV06 445 aaKnown RBP3.08□□□□□ -1.92
ITGB1-214ENST00000488427 NDUFA13Q9P0J0 144 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 KCNN3Q9UGI6 736 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 APPL1Q9UKG1 709 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 MOKQ9UQ07 419 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 MN1Q10571 1320 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-214ENST00000488427 WNK1Q9H4A3 2382 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 SLC9B1P1A6NJY1 282 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 TRIM49D1C9J1S8 452 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 H3BTX0 84 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 KERAO60938 352 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 IGHG3P01860 377 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 IGFBP1P08833 259 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 ALPIP09923 528 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 BCKDHBP21953 392 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 IGHV1-2P23083 117 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 GDI1P31150 447 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 CHRNA3P32297 505 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 RPL4P36578 427 aaKnown RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 RBMXP38159 391 aaKnown RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 KRTAP12-2P59991 146 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 RPL32P62910 135 aaKnown RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 ACTN3Q08043 901 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 USH1GQ495M9 461 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 C2orf83Q53S99 150 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 LCE3AQ5TA76 89 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 LPCAT2Q7L5N7 544 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 TMEM185AQ8NFB2 350 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 NEK11Q8NG66 645 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 WDR36Q8NI36 951 aaKnown RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 PPTC7Q8NI37 304 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 DNAJA3Q96EY1 480 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 C11orf24Q96F05 449 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 ABCG8Q9H221 673 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 CARD9Q9H257 536 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 C8orf33Q9H7E9 229 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 DUS2Q9NX74 493 aaKnown RBP3.07□□□□□ -1.92
ITGB1-214ENST00000488427 EHFQ9NZC4 300 aa3.07□□□□□ -1.92
ITGB1-214ENST00000488427 A0A1W2PNU3 283 aaPredicted RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 M0QZ92 97 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 WWP2O00308 870 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 OLFM2O95897 454 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 H2AFXP16104 143 aaPredicted RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 ANK1P16157 1881 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 ZNF19P17023 458 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 TRPC1P48995 793 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 POU3F4P49335 361 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 RP1P56715 2156 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 NTHL1P78549 312 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 MRPS6P82932 125 aaKnown RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 IL18R1Q13478 541 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 SNX1Q13596 522 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 CAPRIN1Q14444 709 aaKnown RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 PON2Q15165 354 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 CYP51A1Q16850 503 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 AGKQ53H12 422 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 LEG1Q6P5S2 330 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 FAM159AQ6UWV7 190 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 PARGQ86W56 976 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 CNTN4Q8IWV2 1026 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 RNF175Q8N4F7 328 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 OR4F17Q8NGA8 305 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 ITFG1Q8TB96 612 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 ING5Q8WYH8 240 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 PINX1Q96BK5 328 aaKnown RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 CCDC51Q96ER9 411 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 NSMCE2Q96MF7 247 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 ZNF578Q96N58 590 aaPredicted RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 OR4F4Q96R69 305 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 PLEKHF1Q96S99 279 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 RUFY1Q96T51 708 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 AKAP9Q99996 3911 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 ACAT2Q9BWD1 397 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 ZNF106Q9H2Y7 1883 aaKnown RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 EHD1Q9H4M9 534 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 IKZF5Q9H5V7 419 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 IL17CQ9P0M4 197 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 GHRLQ9UBU3 117 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 SLC2A6Q9UGQ3 507 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 IL19Q9UHD0 177 aa3.06□□□□□ -1.92
ITGB1-214ENST00000488427 EIF3LQ9Y262 564 aaKnown RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 STRAPQ9Y3F4 350 aaKnown RBP3.06□□□□□ -1.92
ITGB1-214ENST00000488427 FBLL1A6NHQ2 334 aaKnown RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 ZFP92A6NM28 416 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 SPECC1L-ADORA2AF8WAN1 911 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 NDUFB10O96000 172 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 CD99P14209 185 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 CD1EP15812 388 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 PSMC3P17980 439 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 IDSP22304 550 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 UQCRFS1P47985 274 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 RAG2P55895 527 aa3.05□□□□□ -1.92
ITGB1-214ENST00000488427 DYNLL1P63167 89 aaKnown RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 OC90Q02509 493 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-214ENST00000488427 KYAT1Q16773 422 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms