RNA–Protein interactions for RNA: ENST00000488128.6

COL16A1-214, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 2,854 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-214ENST00000488128 THEM6Q8WUY1 208 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 SLC25A28Q96A46 364 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 MRPS24Q96EL2 167 aaKnown RBP13.1□□□□□ -0.31
COL16A1-214ENST00000488128 HS6ST2Q96MM7 605 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 TOX2Q96NM4 488 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 MNTQ99583 582 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 SLC38A3Q99624 504 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 SYNPO2LQ9H987 977 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 MED17Q9NVC6 651 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 SAGE1Q9NXZ1 904 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 MOKQ9UQ07 419 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 NPFFR2Q9Y5X5 522 aa13.1□□□□□ -0.31
COL16A1-214ENST00000488128 DNASE2O00115 360 aaPredicted RBP13.09□□□□□ -0.31
COL16A1-214ENST00000488128 CACNB4O00305 520 aaPredicted RBP13.09□□□□□ -0.31
COL16A1-214ENST00000488128 MOSPD3O75425 235 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 VSIG10L2P0DP72 767 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 GABRA1P14867 456 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 GALP22466 123 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 EDNRAP25101 427 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 PPM1AP35813 382 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 NRG3P56975 720 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 SORDQ00796 357 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 BDH1Q02338 343 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 LGALS3BPQ08380 585 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 DYRK1AQ13627 763 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 TMEM44Q2T9K0 475 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 SEZ6L2Q6UXD5 910 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 PDZD9Q8IXQ8 264 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 ACOT4Q8N9L9 421 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 SCARB1Q8WTV0 552 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 SLC25A38Q96DW6 304 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 PELI1Q96FA3 418 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 PPP1R16AQ96I34 528 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 MRGPRX3Q96LB0 322 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 DPYSL5Q9BPU6 564 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 RHBGQ9H310 441 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 ANKRD19PQ9H560 264 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 ZNF768Q9H5H4 540 aaKnown RBP13.09□□□□□ -0.31
COL16A1-214ENST00000488128 CLDND1Q9NY35 253 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 ZNF346Q9UL40 294 aaKnown RBP13.09□□□□□ -0.31
COL16A1-214ENST00000488128 LHX6Q9UPM6 363 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 A0A0A6YYD5 115 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 A0A1B0GUH1 482 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 FAM86C2PA6NEL3 165 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 H0YC42 278 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 MTRF1O75570 445 aaKnown RBP13.09□□□□□ -0.31
COL16A1-214ENST00000488128 KRT33AO76009 404 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 FGF2P09038 288 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 F3P13726 295 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 SOX2P48431 317 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 TMEM69Q5SWH9 247 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
COL16A1-214ENST00000488128 ZNF836Q6ZNA1 936 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 OR8K3Q8NH51 312 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 SYNPRQ8TBG9 265 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 SNX33Q8WV41 574 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 FCAMRQ8WWV6 532 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 TRIM43Q96BQ3 446 aaPredicted RBP13.09□□□□□ -0.31
COL16A1-214ENST00000488128 DTD2Q96FN9 168 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 OR52A5Q9H2C5 316 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 SYNDIG1Q9H7V2 258 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 WDR45Q9Y484 360 aa13.09□□□□□ -0.31
COL16A1-214ENST00000488128 IGKV1-8A0A0C4DH67 115 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 A0A1B0GVT2 93 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 AIPO00170 330 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 PEX12O00623 359 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 NDUFA2O43678 99 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 RPP14O95059 124 aaKnown RBP13.08□□□□□ -0.32
COL16A1-214ENST00000488128 RHOP08100 348 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 HTR2AP28223 471 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 ANXA11P50995 505 aaKnown RBP13.08□□□□□ -0.32
COL16A1-214ENST00000488128 RAG2P55895 527 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 CSNK1G2P78368 415 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 PRR5P85299 388 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 STX4Q12846 297 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 KCNAB1Q14722 419 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 HACD4Q5VWC8 232 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 ZNF660Q6AZW8 331 aaPredicted RBP13.08□□□□□ -0.32
COL16A1-214ENST00000488128 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.08□□□□□ -0.32
COL16A1-214ENST00000488128 CMIPQ8IY22 773 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 OR8S1Q8NH09 359 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 OR4C6Q8NH72 309 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 ELP4Q96EB1 424 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 GFI1Q99684 422 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 PRSS27Q9BQR3 290 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 LGR4Q9BXB1 951 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 TSPAN10Q9H1Z9 355 aaPredicted RBP13.08□□□□□ -0.32
COL16A1-214ENST00000488128 EXOSC3Q9NQT5 275 aaKnown RBP13.08□□□□□ -0.32
COL16A1-214ENST00000488128 ANKRD10Q9NXR5 420 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 GON4LQ3T8J9 2241 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 ATG2BQ96BY7 2078 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 SLC22A31A6NKX4 558 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 IFNGR1P15260 489 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 C4BPBP20851 252 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 NT5EP21589 574 aa13.08□□□□□ -0.32
COL16A1-214ENST00000488128 RPS11P62280 158 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL16A1-214ENST00000488128 CTAG1AP78358 180 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms