RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ELOVL3Q9HB03 270 aa3.77□□□□□ -1.81
PRPF38A-203ENST00000487160 RPS10P5Q9NQ39 176 aa3.77□□□□□ -1.81
PRPF38A-203ENST00000487160 MIEF1Q9NQG6 463 aa3.77□□□□□ -1.81
PRPF38A-203ENST00000487160 PNO1Q9NRX1 252 aaKnown RBP3.77□□□□□ -1.81
PRPF38A-203ENST00000487160 TRANK1O15050 2925 aa3.77□□□□□ -1.81
PRPF38A-203ENST00000487160 KIF16BQ96L93 1317 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 A0A1W2PQ72 361 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 GPR89AB7ZAQ6 455 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 FCN1O00602 326 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 MAGEB3O15480 346 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 BCL2L11O43521 198 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 LATO43561 262 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 DUSP14O95147 198 aaKnown RBP3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 ADCY5O95622 1261 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 THY1P04216 161 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 IGKV5-2P06315 115 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 GPR89BP0CG08 455 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 TBXA2RP21731 343 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 IGHV1-2P23083 117 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 SLC25A1P53007 311 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 DSCR10P59022 87 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 LMO4P61968 165 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 CBX1P83916 185 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 VLDLRP98155 873 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 SHHQ15465 462 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 TGIF1Q15583 401 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 PAN3Q58A45 887 aaKnown RBP3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 CFAP157Q5JU67 520 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 ATAD3CQ5T2N8 411 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 PVRIGQ6DKI7 326 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 UFSP1Q6NVU6 142 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 ACOT1Q86TX2 421 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 LCA5Q86VQ0 697 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 SERPINA9Q86WD7 417 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 MARCH9Q86YJ5 346 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 SLC38A6Q8IZM9 456 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 FAM133AQ8N9E0 248 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 KLHL30-AS1Q8NEE0 82 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 AENQ8WTP8 325 aaKnown RBP3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 GTSF1Q8WW33 167 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 IL1F10Q8WWZ1 152 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 ARNTL2Q8WYA1 636 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 ANKRD9Q96BM1 317 aaPredicted RBP3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 KRTAP17-1Q9BYP8 105 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 GLT8D2Q9H1C3 349 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 DPM3Q9P2X0 92 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 RABL2BQ9UNT1 228 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 MRPS33Q9Y291 106 aaKnown RBP3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 MRPS7Q9Y2R9 242 aaKnown RBP3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 NAALAD2Q9Y3Q0 740 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 WDR45Q9Y484 360 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 SIPA1L1O43166 1804 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 FOCADQ5VW36 1801 aa3.76□□□□□ -1.81
PRPF38A-203ENST00000487160 A0A0G2JMZ2 1700 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 WDFY4Q6ZS81 3184 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 NCOR1O75376 2440 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 COL4A4P53420 1690 aaPredicted RBP3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 ZNF236Q9UL36 1845 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 IGHV3-35A0A0C4DH35 117 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 H3BMQ9 156 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 SCRG1O75711 98 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 CD55P08174 381 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 PGCP20142 388 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 HNF1AP20823 631 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 HPCAL1P37235 193 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 GYG1P46976 350 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 PPT1P50897 306 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 SPIBQ01892 262 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 CD47Q08722 323 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 ASAH1Q13510 395 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 NDUFA9Q16795 377 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 SLC5A12Q1EHB4 618 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 QRICH1Q2TAL8 776 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 GLYR1Q49A26 553 aaPredicted RBP3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 SLC22A10Q63ZE4 541 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 CGB2Q6NT52 195 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 KDELC1Q6UW63 502 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 C2orf66Q6UXQ4 117 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 APTXQ7Z2E3 356 aaKnown RBP3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 VASH2Q86V25 355 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 SLC39A11Q8N1S5 342 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 FBXO30Q8TB52 745 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 OR5B2Q96R09 309 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 RIT2Q99578 217 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 OMDQ99983 421 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 DUSP16Q9BY84 665 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 NT5C3AQ9H0P0 336 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 GORASP2Q9H8Y8 452 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 PAK1IP1Q9NWT1 392 aaPredicted RBP3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 DCAF16Q9NXF7 216 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 CHD7Q9P2D1 2997 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 RNF14Q9UBS8 474 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 SAMD4AQ9UPU9 718 aaKnown RBP3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 ZNFX1Q9P2E3 1918 aaKnown RBP3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 MYO9BQ13459 2157 aa3.75□□□□□ -1.81
PRPF38A-203ENST00000487160 IGKV3D-20A0A0C4DH25 116 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 MBLAC1A4D2B0 266 aaPredicted RBP3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 CXCL11O14625 94 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 MTX2O75431 263 aa3.74□□□□□ -1.81
PRPF38A-203ENST00000487160 SPAG6O75602 509 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms