RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 PARD6BQ9BYG5 372 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 RAB34Q9BZG1 259 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 MAGT1Q9H0U3 335 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 CD274Q9NZQ7 290 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 NAP1L2Q9ULW6 460 aaPredicted RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 ABCG2Q9UNQ0 655 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 COPS3Q9UNS2 423 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 SYNJ2BP-COX16A0A087WUM0 186 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 IDSB3KWA1 339 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 MPHOSPH10O00566 681 aaKnown RBP2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 PRKAB2O43741 272 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 SURF6O75683 361 aaKnown RBP2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 DIRAS1O95057 198 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 IL1BP01584 269 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 HMGB2P26583 209 aaKnown RBP2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 HTR1FP30939 366 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 PTGDSP41222 190 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 BIDP55957 195 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 STX17P56962 302 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 LYZP61626 148 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 RPS14P62263 151 aaKnown RBP2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 KLRB1Q12918 225 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 SLC15A2Q16348 729 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 CEP55Q53EZ4 464 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 C1orf220Q5T0J3 134 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF544Q6NX49 715 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 GDPD3Q7L5L3 318 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 VRK2Q86Y07 508 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 PRR22Q8IZ63 422 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 LRRC75A-AS1Q8N1F1 130 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 TMEM252Q8N6L7 170 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 ALLCQ8N6M5 410 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 MFSD9Q8NBP5 474 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 BHLHE23Q8NDY6 225 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 OR2AP1Q8NGE2 309 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 OR5D13Q8NGL4 314 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 OR1E3Q8WZA6 343 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 ST8SIA1Q92185 356 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 SEC22AQ96IW7 307 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 ZBTB18Q99592 522 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 EBF4Q9BQW3 602 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 VCPKMTQ9H867 229 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 ZDHHC11Q9H8X9 412 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 COX16Q9P0S2 106 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 IFT52Q9Y366 437 aa2.5□□□□□ -2.01
SNRNP27-204ENST00000487029 RPAP1Q9BWH6 1393 aaPredicted RBP2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 TTC21BQ7Z4L5 1316 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 HELTA6NFD8 242 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 KLLNB2CW77 178 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 HIP1O00291 1037 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 RGS16O15492 202 aaPredicted RBP2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 MED7O43513 233 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 HCRTR1O43613 425 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 RAMP3O60896 148 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 ATP5LO75964 103 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 TIMP1P01033 207 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 OPN1MWP04001 364 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 RBMY1CP0DJD4 496 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 OPN1MW2P0DN77 364 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 OPN1MW3P0DN78 364 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 GNA11P29992 359 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 CALCRP30988 508 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 MAGEA8P43361 318 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 QARSP47897 775 aaKnown RBP2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 NDPQ00604 133 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 ASPHQ12797 758 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 GRB7Q14451 532 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 NSUN5P1Q3KNT7 163 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 MAJINQ3KP22 176 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 KLF17Q5JT82 389 aaPredicted RBP2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 PDZK1Q5T2W1 519 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 GPRC6AQ5T6X5 926 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 EFL1Q7Z2Z2 1120 aaKnown RBP2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 FAM220AQ7Z4H9 259 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 CCDC65Q8IXS2 484 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 TRPV1Q8NER1 839 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 OR52I1Q8NGK6 324 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 LINC01006Q8NI28 216 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 CHCHD10Q8WYQ3 142 aaPredicted RBP2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 UBE2E3Q969T4 207 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 MARC2Q969Z3 335 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 TECTBQ96PL2 329 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 SLC38A2Q96QD8 506 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 COPS8Q99627 209 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 SLC39A3Q9BRY0 314 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 REEP4Q9H6H4 257 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 NHEJ1Q9H9Q4 299 aaPredicted RBP2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 SH2D2AQ9NP31 389 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 IL17CQ9P0M4 197 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 PRO0461Q9UI25 63 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 BTNL2Q9UIR0 455 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 ADAM28Q9UKQ2 775 aa2.49□□□□□ -2.01
SNRNP27-204ENST00000487029 SH3TC1Q8TE82 1336 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 A0A0G2JRQ6 117 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 DCTN6O00399 190 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 NBR2O15453 112 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 UGT1A9O60656 530 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 MMP23AO75900 390 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 SNAPINO95295 136 aa2.48□□□□□ -2.01
SNRNP27-204ENST00000487029 LGI1O95970 557 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms