RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PIGXQ8TBF5 258 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 RLIMQ9NVW2 624 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 CISD1Q9NZ45 108 aaKnown RBP21.65■■□□□ 1.06
LIME1-206ENST00000487026 TMEM181Q9P2C4 612 aa21.65■■□□□ 1.06
LIME1-206ENST00000487026 A0A1W2PR80 420 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 CIB4A0PJX0 185 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 OR5H1A6NKK0 313 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 CCT8L1PA6NM43 557 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 SHISA9B4DS77 424 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 PTNP21246 168 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 FKBP2P26885 142 aaKnown RBP21.64■■□□□ 1.05
LIME1-206ENST00000487026 ANXA11P50995 505 aaKnown RBP21.64■■□□□ 1.05
LIME1-206ENST00000487026 POLR2HP52434 150 aaKnown RBP21.64■■□□□ 1.05
LIME1-206ENST00000487026 MAPK11Q15759 364 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 CLEC12BQ2HXU8 276 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 SLC9B1Q4ZJI4 515 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 MRPL2Q5T653 305 aaKnown RBP21.64■■□□□ 1.05
LIME1-206ENST00000487026 CMIPQ8IY22 773 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 OR52N5Q8NH56 324 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 TRMT61AQ96FX7 289 aaKnown RBP21.64■■□□□ 1.05
LIME1-206ENST00000487026 TRAPPC4Q9Y296 219 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 HIVEP2P31629 2446 aa21.64■■□□□ 1.05
LIME1-206ENST00000487026 ZC3H12DA2A288 527 aaKnown RBP21.63■■□□□ 1.05
LIME1-206ENST00000487026 CFAP73A6NFT4 308 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 INAFM1C9JVW0 142 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 RFXANKO14593 260 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 GPR171O14626 319 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 ABCD4O14678 606 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 MRPL33O75394 65 aaKnown RBP21.63■■□□□ 1.05
LIME1-206ENST00000487026 SLC22A3O75751 556 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 CD8AP01732 235 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 RPS4Y1P22090 263 aaKnown RBP21.63■■□□□ 1.05
LIME1-206ENST00000487026 SLC1A3P43003 542 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 SLC16A1P53985 500 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 H3F3AP84243 136 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 P2RY8Q86VZ1 359 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 GLB1L3Q8NCI6 653 aaPredicted RBP21.63■■□□□ 1.05
LIME1-206ENST00000487026 DDIT4LQ96D03 193 aa21.63■■□□□ 1.05
LIME1-206ENST00000487026 RNF223E7ERA6 249 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 DNPH1O43598 174 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 NDUFS7O75251 213 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 KRT75O95678 551 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 DBIP07108 87 aaKnown RBP21.62■■□□□ 1.05
LIME1-206ENST00000487026 GKN3PP0CG01 181 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 ETFAP13804 333 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 MAGEA8P43361 318 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 ZNF83P51522 516 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 MVDP53602 400 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 MAGOHP61326 146 aaKnown RBP21.62■■□□□ 1.05
LIME1-206ENST00000487026 SLC35A1P78382 337 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 TXNL4AP83876 142 aaKnown RBP21.62■■□□□ 1.05
LIME1-206ENST00000487026 LRRC74AQ0VAA2 488 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 EPS8Q12929 822 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 VEZF1Q14119 521 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 GNA13Q14344 377 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 PDCD4Q53EL6 469 aaKnown RBP21.62■■□□□ 1.05
LIME1-206ENST00000487026 ATG16L1Q676U5 607 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 MAVSQ7Z434 540 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 VRK2Q86Y07 508 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 OR52E4Q8NGH9 312 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 MANSC1Q9H8J5 431 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 ASB6Q9NWX5 421 aa21.62■■□□□ 1.05
LIME1-206ENST00000487026 ZNF208O43345 1280 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 IL6P05231 212 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 IDO1P14902 403 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 IDUAP35475 653 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 ACVR1BP36896 505 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 CRATP43155 626 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 CDH11P55287 796 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 GTDC1Q4AE62 458 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 C9orf135Q5VTT2 229 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 PRIMA1Q86XR5 153 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 PEX5LQ8IYB4 626 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
LIME1-206ENST00000487026 PMM1Q92871 262 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 TRAF4Q9BUZ4 470 aaPredicted RBP21.61■■□□□ 1.05
LIME1-206ENST00000487026 C1QTNF6Q9BXI9 259 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 ADAM19Q9H013 955 aa21.61■■□□□ 1.05
LIME1-206ENST00000487026 GDF2Q9UK05 429 aaPredicted RBP21.61■■□□□ 1.05
LIME1-206ENST00000487026 IGHV4-39P01824 125 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 SPOCK1Q08629 439 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 CASP12Q6UXS9 341 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 ZNF836Q6ZNA1 936 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 OR52P1PQ8NH57 321 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 AURKBQ96GD4 344 aaPredicted RBP21.6■■□□□ 1.05
LIME1-206ENST00000487026 MAELQ96JY0 434 aaKnown RBP21.6■■□□□ 1.05
LIME1-206ENST00000487026 OR52B2Q96RD2 323 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 NAA11Q9BSU3 229 aaPredicted RBP21.6■■□□□ 1.05
LIME1-206ENST00000487026 SLCO5A1Q9H2Y9 848 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 FLVCR1Q9Y5Y0 555 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 SLC25A15Q9Y619 301 aa21.6■■□□□ 1.05
LIME1-206ENST00000487026 SLCO1B7G3V0H7 640 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 FAAHO00519 579 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 EIF1BO60739 113 aaKnown RBP21.59■■□□□ 1.05
LIME1-206ENST00000487026 ANP32DO95626 131 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 BCHEP06276 602 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 ITGA5P08648 1049 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 PPP2R2BQ00005 443 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 GABRA6Q16445 453 aa21.59■■□□□ 1.05
LIME1-206ENST00000487026 RPS26P11Q5JNZ5 115 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms