RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 NLRP8Q86W28 1048 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF283Q8N7M2 679 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ZSCAN4Q8NAM6 433 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ANGPTL6Q8NI99 470 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 THAP6Q8TBB0 222 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 UBE2FQ969M7 185 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 LINC00615Q96LM1 132 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 OR6C1Q96RD1 312 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 CCNL2Q96S94 520 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ALG8Q9BVK2 526 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 NTN4Q9HB63 628 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 SLC35A3Q9Y2D2 325 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 TLCD2A6NGC4 264 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 SHISA7A6NL88 538 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 HCKP08631 526 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 PNMTP11086 282 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 GPLD1P80108 840 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 RAB40BQ12829 278 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 EIF4EBP2Q13542 120 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 GPR137CQ8N3F9 429 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 MS4A15Q8N5U1 240 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 C7orf50Q9BRJ6 194 aaKnown RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 A4GALTQ9NPC4 353 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 UBQLN4Q9NRR5 601 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 WNT16Q9UBV4 365 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 OR5K3A6NET4 321 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 PLRG1O43660 514 aaKnown RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ITGA5P08648 1049 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ZP2Q05996 745 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 RBPJQ06330 500 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 PGGHGQ32M88 737 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 METTL11BQ5VVY1 283 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 C3P1Q6ZMU1 363 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 SPRED2Q7Z698 418 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 RBM45Q8IUH3 476 aaKnown RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 NAXEQ8NCW5 288 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 CPNE2Q96FN4 548 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF471Q9BX82 626 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 NXT1Q9UKK6 140 aaKnown RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 CABIN1Q9Y6J0 2220 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 FABP7O15540 132 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 CSTBP04080 98 aaKnown RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 M6PRP20645 277 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 VASPP50552 380 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 P2RX3P56373 397 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 PRPS1P60891 318 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 DCDP81605 110 aaKnown RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 TSPAN31Q12999 210 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 GPNMBQ14956 572 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 MFSD13AQ14CX5 517 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 TP53I3Q53FA7 332 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 MFSD12Q6NUT3 480 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 FIP1L1Q6UN15 594 aaKnown RBP10.24□□□□□ -0.77
HDAC6-228ENST00000486227 SLC16A12Q6ZSM3 486 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 TMPRSS12Q86WS5 348 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 DNAJC5GQ8N7S2 189 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 OR2A1Q8NGT9 310 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 CSF3RQ99062 836 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 PCDHGA6Q9Y5G7 932 aa10.24□□□□□ -0.77
HDAC6-228ENST00000486227 CACNA1CQ13936 2221 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 SLC22A5O76082 557 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TFP02787 698 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 DRD5P21918 477 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 SFTPDP35247 375 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 C3orf38Q5JPI3 329 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TMEM64Q6YI46 380 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 ZER1Q7Z7L7 766 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TEX101Q9BY14 249 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TAS2R16Q9NYV7 291 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 SEC16AO15027 2179 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 CD46P15529 392 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 HTR2AP28223 471 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 RPL35P42766 123 aaKnown RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TSFMP43897 325 aaKnown RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 LIM2P55344 173 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 PSPHP78330 225 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 BTN1A1Q13410 526 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 PRSS36Q5K4E3 855 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 ANKRD34AQ69YU3 496 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TIGD3Q6B0B8 471 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 FBXL6Q8N531 539 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 OR4F15Q8NGB8 312 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 CDX2Q99626 313 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 DAPP1Q9UN19 280 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 LTBP1Q14766 1721 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 PVALBP20472 110 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 APEX1P27695 318 aaKnown RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 ADH7P40394 386 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 SLC6A8P48029 635 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 UBE2NP61088 152 aaKnown RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 PDE7AQ13946 482 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TRMT12Q53H54 448 aaKnown RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 IDO2Q6ZQW0 420 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 LRRC28Q86X40 367 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 SFTPA1Q8IWL2 248 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 NLGN4YQ8NFZ3 816 aaPredicted RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 OR13C2Q8NGS9 318 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TRMT10AQ8TBZ6 339 aaKnown RBP10.23□□□□□ -0.77
HDAC6-228ENST00000486227 TMEM9BQ9NQ34 198 aa10.23□□□□□ -0.77
HDAC6-228ENST00000486227 ZNF639Q9UID6 485 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms