RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 MED13LQ71F56 2210 aa16.31■□□□□ 0.2
PRPF40A-209ENST00000486100 GPR171O14626 319 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 EIF1BO60739 113 aaKnown RBP16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 NUDT7P0C024 238 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 GKN3PP0CG01 181 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 BMP2P12643 396 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 H2AFXP16104 143 aaPredicted RBP16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 EDNRAP25101 427 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 SLC35A1P78382 337 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 H3F3AP84243 136 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 TAB1Q15750 504 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 RPS26P11Q5JNZ5 115 aaPredicted RBP16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 LRIF1Q5T3J3 769 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 RNF220Q5VTB9 566 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 PRAMEF8Q5VWM4 474 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 PRAMEF7Q5VXH5 474 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 SHEQ5VZ18 495 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 ZNF704Q6ZNC4 412 aaPredicted RBP16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 BHLHA15Q7RTS1 189 aaPredicted RBP16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 CCDC103Q8IW40 242 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 LRRC75A-AS1Q8N1F1 130 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 CLIP4Q8N3C7 705 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 WFDC11Q8NEX6 87 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 CKAP2Q8WWK9 683 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 SPDL1Q96EA4 605 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 TMEM204Q9BSN7 226 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 SPATA9Q9BWV2 254 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 ARMC7Q9H6L4 198 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 CACYBPQ9HB71 228 aaKnown RBP16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 A4GALTQ9NPC4 353 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 NGBQ9NPG2 151 aa16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 NOSIPQ9Y314 301 aaKnown RBP16.3■□□□□ 0.2
PRPF40A-209ENST00000486100 ARHGEF9O43307 516 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 SMPD2O60906 423 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 PLAUP00749 431 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 IMPDH2P12268 514 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 CXCR1P25024 350 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 ATP4BP51164 291 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 SLC16A1P53985 500 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 COPZ1P61923 177 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 WBP2NLQ6ICG8 309 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 ALKBH2Q6NS38 261 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 MAGEB18Q96M61 343 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 CCL19Q99731 98 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 NAA11Q9BSU3 229 aaPredicted RBP16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 POTEKPQ9BYX7 375 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 DLL4Q9NR61 685 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 SLC25A37Q9NYZ2 338 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 SLAMF8Q9P0V8 285 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 CHST2Q9Y4C5 530 aa16.29■□□□□ 0.2
PRPF40A-209ENST00000486100 ZC3H12DA2A288 527 aaKnown RBP16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 NR5A2O00482 541 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 LYZL6O75951 148 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 FOSL1P15407 271 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 IGHV1-2P23083 117 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 NTF4P34130 210 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 AGKQ53H12 422 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 ZNF311Q5JNZ3 666 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 PAGE3Q5JUK9 113 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 FBXW9Q5XUX1 488 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 KRTAP1-3Q8IUG1 177 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 P3H2Q8IVL5 708 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 MSRB3Q8IXL7 192 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 BBS10Q8TAM1 723 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 STON2Q8WXE9 905 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 MAL2Q969L2 176 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 APH1AQ96BI3 265 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 GMEB1Q9Y692 573 aa16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 MAP1AP78559 2803 aaPredicted RBP16.28■□□□□ 0.2
PRPF40A-209ENST00000486100 C5orf58C9J3I9 102 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 RAMP1O60894 148 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 MRPL33O75394 65 aaKnown RBP16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 PGM3O95394 542 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 PRG2P13727 222 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 COX5AP20674 150 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 PPIBP23284 216 aaKnown RBP16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 CAPRIN1Q14444 709 aaKnown RBP16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 SQLEQ14534 574 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 NCMAPQ5T1S8 102 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 UBE2J2Q8N2K1 259 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 CADM2Q8N3J6 435 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 SLC35B4Q969S0 331 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 RABEP2Q9H5N1 569 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 ESRP2Q9H6T0 727 aaKnown RBP16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 VAPAQ9P0L0 249 aa16.27■□□□□ 0.2
PRPF40A-209ENST00000486100 A0A1W2PP18 115 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 A8MVM7 634 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 HS3ST1O14792 307 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 GPIP06744 558 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 ETS2P15036 469 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 GGT1P19440 569 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 NCF2P19878 526 aaPredicted RBP16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 IDUAP35475 653 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 CEACAM7Q14002 265 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 SLC17A1Q14916 467 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 TIMM23BQ5SRD1 257 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 ADAM5Q6NVV9 412 aa16.26■□□□□ 0.19
PRPF40A-209ENST00000486100 PAQR6Q6TCH4 344 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms