RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 EBF4Q9BQW3 602 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SPATA9Q9BWV2 254 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SRXN1Q9BYN0 137 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 ARMC7Q9H6L4 198 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 A4GALTQ9NPC4 353 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 CTPS2Q9NRF8 586 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 CCM2LQ9NUG4 571 aaPredicted RBP6.23□□□□□ -1.41
VPS50-218ENST00000485994 MRGBPQ9NV56 204 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 OSGIN1Q9UJX0 560 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 SETD2Q9BYW2 2564 aaPredicted RBP6.23□□□□□ -1.41
VPS50-218ENST00000485994 C2CD3Q4AC94 2353 aa6.23□□□□□ -1.41
VPS50-218ENST00000485994 TRBV5-3A0A0A0MS03 114 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 A0A1W2PNR3 127 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 A0A1W2PPR1 153 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 TMEM247A6NEH6 219 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 CFAP73A6NFT4 308 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 CLDN24A6NM45 220 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ZNF814B7Z6K7 855 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 C9JVG2 144 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 SMAD9O15198 467 aaKnown RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 EDF1O60869 148 aaKnown RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 ADAM11O75078 769 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 FZD7O75084 574 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 BCAS1O75363 584 aaPredicted RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 CYP7B1O75881 506 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ATE1O95260 518 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 PGM3O95394 542 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 THBDP07204 575 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ETFAP13804 333 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 UQCRBP14927 111 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 FOSL1P15407 271 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 CD53P19397 219 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 CCKARP32238 428 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 OR3A2P47893 321 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 KCNJ5P48544 419 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 IDH2P48735 452 aaKnown RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 POLR2HP52434 150 aaKnown RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 NR1H2P55055 460 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ITGADQ13349 1161 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 LARS2Q15031 903 aaKnown RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 LIN52Q52LA3 116 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 BEX5Q5H9J7 111 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 MRPL2Q5T653 305 aaKnown RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 ABLIM2Q6H8Q1 611 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ADAM5Q6NVV9 412 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 PAMR1Q6UXH9 720 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 TFAP2EQ6VUC0 442 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 Q6ZT83 130 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 OLIG3Q7RTU3 272 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 NUFIP2Q7Z417 695 aaKnown RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 P2RY8Q86VZ1 359 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 LRRC75A-AS1Q8N1F1 130 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 DPP10Q8N608 796 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 TMCO5AQ8N6Q1 288 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 BHLHE22Q8NFJ8 381 aaPredicted RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 OR9I1Q8NGQ6 314 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 OR52P1PQ8NH57 321 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ABHD3Q8WU67 409 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 DYDC1Q8WWB3 177 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 VPS33AQ96AX1 596 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 DDIT4LQ96D03 193 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 SPDL1Q96EA4 605 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ZHX1-C8orf76Q96EF9 292 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 BOD1Q96IK1 185 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 OR5B2Q96R09 309 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 MED18Q9BUE0 208 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 QRSL1Q9H0R6 528 aaKnown RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 LIME1Q9H400 295 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ZNF385DQ9H6B1 395 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 TMEM38AQ9H6F2 299 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 TMEM185BQ9H7F4 350 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 C12orf10Q9HB07 376 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 BEX4Q9NWD9 120 aaPredicted RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 CCDC167Q9P0B6 97 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 TMEM181Q9P2C4 612 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 ITGB1BP2Q9UKP3 347 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 CLEC4AQ9UMR7 237 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 CORO2BQ9UQ03 480 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 RAI1Q7Z5J4 1906 aaPredicted RBP6.22□□□□□ -1.41
VPS50-218ENST00000485994 NAV3Q8IVL0 2385 aa6.22□□□□□ -1.41
VPS50-218ENST00000485994 TMED7-TICAM2A0A0A6YYA0 188 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 ZNF716A6NP11 495 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 NPIPB7O75200 414 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 VAMP5O95183 116 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 NPPAP01160 153 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 BCHEP06276 602 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 ARAFP10398 606 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 PAX1P15863 534 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 FPR1P21462 350 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 TACR3P29371 465 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 ADSLP30566 484 aaPredicted RBP6.21□□□□□ -1.42
VPS50-218ENST00000485994 HOXC12P31275 282 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 RYKP34925 604 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 CPOXP36551 454 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 CCR4P51679 360 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 ART1P52961 327 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 SLC35A1P78382 337 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 RBBP4Q09028 425 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 SQLEQ14534 574 aa6.21□□□□□ -1.42
VPS50-218ENST00000485994 SLC17A1Q14916 467 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms