RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 RBM45Q8IUH3 476 aaKnown RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 LIX1LQ8IVB5 337 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 MCEMP1Q8IX19 187 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 CNEP1R1Q8N9A8 125 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 ELOA3Q8NG57 546 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 OR4D11Q8NGI4 311 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 OR6T1Q8NGN1 323 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 CPNE4Q96A23 557 aaPredicted RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 ARL5BQ96KC2 179 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 ZFP3Q96NJ6 502 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 PSMG3-AS1Q96PY0 264 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 UCK2Q9BZX2 261 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 ADPRHL2Q9NX46 363 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 CLEC4AQ9UMR7 237 aa10.61□□□□□ -0.71
HPS4-214ENST00000485842 SPTAN1Q13813 2472 aaKnown RBP10.61□□□□□ -0.71
HPS4-214ENST00000485842 INTS1Q8N201 2190 aaKnown RBP10.6□□□□□ -0.71
HPS4-214ENST00000485842 ICE1Q9Y2F5 2266 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 A0A1W2PNV4 684 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 EEF1E1-BLOC1S5C9J1V9 151 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 EEF1E1O43324 174 aaKnown RBP10.6□□□□□ -0.71
HPS4-214ENST00000485842 ZNF208O43345 1280 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 TPST2O60704 377 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 GMNNO75496 209 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 SERPINA1P01009 418 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 T-ENOLP0DO92 83 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 KLK2P20151 261 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 PTNP21246 168 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 HTR1EP28566 365 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 MSX2P35548 267 aaPredicted RBP10.6□□□□□ -0.71
HPS4-214ENST00000485842 CPOXP36551 454 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 OR1E2P47887 323 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 OR2B6P58173 313 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 RAC3P60763 192 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 CSNK2A1P68400 391 aaPredicted RBP10.6□□□□□ -0.71
HPS4-214ENST00000485842 ALG10BQ5I7T1 473 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 GLYATQ6IB77 296 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 TMPPEQ6ZT21 453 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 FCRLAQ7L513 359 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 MAMDC2Q7Z304 686 aaPredicted RBP10.6□□□□□ -0.71
HPS4-214ENST00000485842 LSMEM1Q8N8F7 131 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 RELL2Q8NC24 303 aaPredicted RBP10.6□□□□□ -0.71
HPS4-214ENST00000485842 LILRB4Q8NHJ6 448 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 DNAJA4Q8WW22 397 aaPredicted RBP10.6□□□□□ -0.71
HPS4-214ENST00000485842 LZICQ8WZA0 190 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 ZHX1-C8orf76Q96EF9 292 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 HSH2DQ96JZ2 352 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 SFXN3Q9BWM7 321 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 RNF122Q9H9V4 155 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 KCNJ16Q9NPI9 418 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 PLEKHB1Q9UF11 243 aaPredicted RBP10.6□□□□□ -0.71
HPS4-214ENST00000485842 PRDM4Q9UKN5 801 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 HDGFL3Q9Y3E1 203 aa10.6□□□□□ -0.71
HPS4-214ENST00000485842 A0A0B4J2E0 115 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 A0A1B0GX12 115 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 A8MVM7 634 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 TMEM229AB2RXF0 380 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 SMAD9O15198 467 aaKnown RBP10.59□□□□□ -0.71
HPS4-214ENST00000485842 FMO6PO60774 539 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 AHSA1O95433 338 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 IMPDH2P12268 514 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 HSD17B1P14061 328 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 ENPP1P22413 925 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 FKBP2P26885 142 aaKnown RBP10.59□□□□□ -0.71
HPS4-214ENST00000485842 OPRM1P35372 400 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 IDUAP35475 653 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 CLK1P49759 484 aaKnown RBP10.59□□□□□ -0.71
HPS4-214ENST00000485842 MAP2K6P52564 334 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 CTBP2P56545 445 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 CEACAM7Q14002 265 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 SLC25A35Q3KQZ1 300 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 ENTPD8Q5MY95 495 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 C1orf140Q5VVS0 124 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 ULK3Q6PHR2 472 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 VTCN1Q7Z7D3 282 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 P3H2Q8IVL5 708 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 RNF128Q8TEB7 428 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 ABHD3Q8WU67 409 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 SLC47A1Q96FL8 570 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 MAGEL2Q9UJ55 1249 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 V9GYQ6 96 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 PTPN13Q12923 2485 aa10.59□□□□□ -0.71
HPS4-214ENST00000485842 USP9YO00507 2555 aaPredicted RBP10.59□□□□□ -0.71
HPS4-214ENST00000485842 TRAPPC13A5PLN9 417 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 ARPC2O15144 300 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 SMNDC1O75940 238 aaKnown RBP eCLIP10.58□□□□□ -0.72
HPS4-214ENST00000485842 PDE5AO76074 875 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 PMS2P2O95744 297 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 IL18BPO95998 194 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 CRHP06850 196 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 PNMTP11086 282 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 COL8A1P27658 744 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 GRNP28799 593 aaKnown RBP10.58□□□□□ -0.72
HPS4-214ENST00000485842 ASCL1P50553 236 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 CDH12P55289 794 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 SELENOWP63302 87 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 FOXD4Q12950 439 aaPredicted RBP10.58□□□□□ -0.72
HPS4-214ENST00000485842 OR7A5Q15622 319 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 IFI44LQ53G44 452 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 HIST2H2BCQ6DN03 193 aa10.58□□□□□ -0.72
HPS4-214ENST00000485842 VWA1Q6PCB0 445 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms