RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 KLHL38Q2WGJ6 581 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 TIGITQ495A1 244 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 CFAP221Q4G0U5 840 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 TP53I3Q53FA7 332 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 C1orf220Q5T0J3 134 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 CDR2LQ86X02 465 aaPredicted RBP2.8□□□□□ -1.96
SMC4-215ENST00000484799 C9orf40Q8IXQ3 194 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 CADM2Q8N3J6 435 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 CEP112Q8N8E3 955 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 OR2T33Q8NG76 320 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 DPH7Q9BTV6 452 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 CHRDL1Q9BU40 450 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 TSSK1BQ9BXA7 367 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 RHBGQ9H310 441 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 GLIPR2Q9H4G4 154 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 AZI2Q9H6S1 392 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 NHEJ1Q9H9Q4 299 aaPredicted RBP2.8□□□□□ -1.96
SMC4-215ENST00000484799 SLC2A6Q9UGQ3 507 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 PHF11Q9UIL8 331 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 IFT52Q9Y366 437 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 N6AMT1Q9Y5N5 214 aa2.8□□□□□ -1.96
SMC4-215ENST00000484799 ARHGEF35A5YM69 484 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 MED7O43513 233 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 HCN1O60741 890 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 ERLIN1O75477 346 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 DUSP14O95147 198 aaKnown RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 LALBAP00709 142 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 ALOX5P09917 674 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 TROVE2P10155 538 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMC4-215ENST00000484799 COX5AP20674 150 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 PCMT1P22061 227 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 IGHV1-2P23083 117 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 GCAP28676 217 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 GNA11P29992 359 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 FGF9P31371 208 aaPredicted RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 GYG1P46976 350 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 DAP3P51398 398 aaKnown RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 DUSP3P51452 185 aaPredicted RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 PLK1P53350 603 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 MRPS11P82912 194 aaKnown RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 CHRNB3Q05901 458 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 SLC10A7Q0GE19 358 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 ASPHQ12797 758 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 KLRB1Q12918 225 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 TMEM52BQ4KMG9 183 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 ARMC12Q5T9G4 340 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 OR5M10Q6IEU7 315 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 CCDC137Q6PK04 289 aaKnown RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 DNM1P46Q6ZS02 220 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 H2BFWTQ7Z2G1 175 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 FAM228AQ86W67 206 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 EGFL6Q8IUX8 553 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 SVOPLQ8N434 492 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 OR4D9Q8NGE8 314 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 OR51G2Q8NGK0 314 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 OR5L2Q8NGL0 311 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 RNF138Q8WVD3 245 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 HTR3CQ8WXA8 447 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 UBE2E3Q969T4 207 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 ELSPBP1Q96BH3 223 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 C10orf35Q96D05 121 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 CELF6Q96J87 481 aaKnown RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 IFT74Q96LB3 600 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 SLC38A2Q96QD8 506 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 CCNL2Q96S94 520 aaPredicted RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 ZNF670Q9BS34 389 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 ROPN1BQ9BZX4 212 aaPredicted RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 NCOR1P1Q9H4R4 102 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 CAB39LQ9H9S4 337 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 POLE4Q9NR33 117 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 RAB20Q9NX57 234 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 SLC2A8Q9NY64 477 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 SPRR3Q9UBC9 169 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 ZNF639Q9UID6 485 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 COPS3Q9UNS2 423 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 MEMO1Q9Y316 297 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 CAB39Q9Y376 341 aaPredicted RBP2.79□□□□□ -1.96
SMC4-215ENST00000484799 USP16Q9Y5T5 823 aa2.79□□□□□ -1.96
SMC4-215ENST00000484799 ANKRD30BQ9BXX2 1392 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 PPIAL4EA0A075B759 164 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 LOC100131303A0A0U1RQF7 123 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 A0A1B0GVL5 298 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 ZFP92A6NM28 416 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 K7ENP7 123 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 SULT2B1O00204 365 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 FCN1O00602 326 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 PRKYO43930 277 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 OR10H3O60404 316 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 SCRG1O75711 98 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 GNA14O95837 355 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 LGALS2P05162 132 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 STSP08842 583 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 UQCRFS1P1P0C7P4 283 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 PPIAL4FP0DN26 164 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 MCF2P10911 925 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 ANXA13P27216 316 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 CCR1P32246 355 aa2.78□□□□□ -1.96
SMC4-215ENST00000484799 RPL29P47914 159 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms