RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 GDI1P31150 447 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 APLNRP35414 380 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 PITPNAQ00169 270 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 NOGQ13253 232 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 LY6KQ17RY6 165 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 XKR4Q5GH76 650 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 FBXW9Q5XUX1 488 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 PTRHD1Q6GMV3 140 aaKnown RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 VHLLQ6RSH7 139 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 BPIFB2Q8N4F0 458 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 OR1N1Q8NGS0 311 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 NT5C3BQ969T7 300 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 COPS8Q99627 209 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 FSD1LQ9BXM9 530 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TEX101Q9BY14 249 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 RHOFQ9HBH0 211 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 IL20RAQ9UHF4 553 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 ZNF230Q9UIE0 474 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TBC1D3DA0A087WVF3 549 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TBC1D3IA0A087WXS9 549 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TBC1D3EA0A087X179 549 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TBC1D3KA0A087X1G2 549 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 A0A0G2JLL6 359 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TBC1D3FA6NER0 549 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TBC1D3LB9A6J9 549 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 SMAD6O43541 496 aaKnown RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 ITGA10O75578 1167 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 OSMP13725 252 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 CDKN1BP46527 198 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 NDUFV1P49821 464 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 MECP2P51608 486 aaKnown RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 HMGA2P52926 109 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TTLL4Q14679 1199 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 PTPRNQ16849 979 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 AWAT1Q58HT5 328 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 OR2A2Q6IF42 318 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TBC1D3CQ6IPX1 549 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 CXorf57Q6NSI4 855 aaKnown RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 SLC36A1Q7Z2H8 476 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 PRRT2Q7Z6L0 340 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 TBC1D3Q8IZP1 549 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 FAM26EQ8N5C1 309 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 LRRC52Q8N7C0 313 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 FBXO15Q8NCQ5 510 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 C16orf78Q8WTQ4 265 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 THOC3Q96J01 351 aaKnown RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 INSM2Q96T92 566 aaPredicted RBP7.25□□□□□ -1.25
COL4A5-205ENST00000483338 UBQLN3Q9H347 655 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 MFSD1Q9H3U5 465 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 THSD1Q9NS62 852 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 KLK14Q9P0G3 267 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 FBXL4Q9UKA2 621 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 FAM50BQ9Y247 325 aa7.25□□□□□ -1.25
COL4A5-205ENST00000483338 RNF222A6NCQ9 220 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 H3BN98 237 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 PYCARD-AS1I3L0S3 204 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 MATN3O15232 486 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 HYAL3O43820 417 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-205ENST00000483338 FABP4P15090 132 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 S1PR1P21453 382 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 TACR3P29371 465 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 ZNF84P51523 738 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 SHC2P98077 582 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 ZXDBP98169 803 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 SERINC3Q13530 473 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 SLC10A1Q14973 349 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 FAM189A2Q15884 450 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 CFAP161Q6P656 301 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 DHRS11Q6UWP2 260 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 IL34Q6ZMJ4 242 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 NRROSQ86YC3 692 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 DEFB106AQ8N104 65 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 MUC20Q8N307 709 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-205ENST00000483338 ZCCHC10Q8TBK6 192 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 CCDC107Q8WV48 283 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 LINGO1Q96FE5 620 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 SPATA33Q96N06 139 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 MRI1Q9BV20 369 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 SPATC1LQ9H0A9 340 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 OR52A5Q9H2C5 316 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 OR51V1Q9H2C8 321 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 ZFYVE1Q9HBF4 777 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 H2AFY2Q9P0M6 372 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-205ENST00000483338 PRODH2Q9UF12 536 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 UBE2QL1A1L167 161 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 OR5H15A6NDH6 313 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 OR5H1A6NKK0 313 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 RNASEK-C17orf49H0YIS7 233 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 TP53I11O14683 189 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 TLR5O60602 858 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 LRATO95237 230 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 PRAMEF12O95522 483 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 PLGP00747 810 aaPredicted RBP7.24□□□□□ -1.25
COL4A5-205ENST00000483338 LRG1P02750 347 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 TACR1P25103 407 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 PPP2R1BP30154 601 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 THBS4P35443 961 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 XCR1P46094 333 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 CNTN1Q12860 1018 aa7.24□□□□□ -1.25
COL4A5-205ENST00000483338 ZNF345Q14585 488 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms