RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 VANGL2Q9ULK5 521 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 STAP1Q9ULZ2 295 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 BARX2Q9UMQ3 279 aaPredicted RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 POLDIP2Q9Y2S7 368 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 STARD10Q9Y365 291 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 CSDC2Q9Y534 153 aaKnown RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 PEX16Q9Y5Y5 336 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 KIF25-AS1Q9Y6Z4 181 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 GAKO14976 1311 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 GRIN2DO15399 1336 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 AFF2P51816 1311 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 SH3TC1Q8TE82 1336 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 INSRP06213 1382 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 ATP10AO60312 1499 aa2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 COL4A4P53420 1690 aaPredicted RBP2.31□□□□□ -2.04
LAPTM4A-202ENST00000483117 RALGAPA1Q6GYQ0 2036 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 KCNE1BA0A087WTH5 132 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 KBTBD11-OT1A0A1B0GTJ5 212 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 hCG_38984A0A1B0GV85 526 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 A0A1W2PQ72 361 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 LRIT2A6NDA9 550 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 A8MUA0 341 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 SERPINE3A8MV23 424 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 BCKDKO14874 412 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RRP8O43159 456 aaKnown RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 PRKAB2O43741 272 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 HCN1O60741 890 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CLPXO76031 633 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 B3GAT3O94766 335 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 IGF1P05019 195 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 HBQ1P09105 142 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CLTAP09496 248 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ANXA3P12429 323 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ATP1B2P14415 290 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 SELEP16581 610 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 HOXB8P17481 243 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 MMP11P24347 488 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 GIFP27352 417 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CD1CP29017 333 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CDH5P33151 784 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CD80P33681 288 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RPL4P36578 427 aaKnown RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 FEN1P39748 380 aaKnown RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 GPR4P46093 362 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 KCNJ3P48549 501 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 NOVA1P51513 510 aaKnown RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ATP1B3P54709 279 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RAB10P61026 200 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 BTG1P62324 171 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CTAG1AP78358 180 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RAD51Q06609 339 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RIPPLY1Q0D2K3 151 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ASPHQ12797 758 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLAQ13239 276 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RCAN2Q14206 197 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ZNF146Q15072 292 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 KLHL38Q2WGJ6 581 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 VPS26BQ4G0F5 336 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 GGTA1PQ4G0N0 100 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 LGSNQ5TDP6 509 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 AGAP7PQ5VUJ5 663 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 STUMQ69YW2 141 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC8B1Q6J4K2 584 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 STEAP1BQ6NZ63 245 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 C8orf74Q6P047 294 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 C3P1Q6ZMU1 363 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ITIH5Q86UX2 942 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 TRIM69Q86WT6 500 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RNF130Q86XS8 419 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 VRK2Q86Y07 508 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 TBC1D10CQ8IV04 446 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ERI1Q8IV48 349 aaKnown RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 NKAIN4Q8IVV8 208 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CLEC4FQ8N1N0 589 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 C15orf54Q8N8G6 183 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CHDHQ8NE62 594 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 OR2L3Q8NG85 312 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 OR52B6Q8NGF0 335 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 MARCH1Q8TCQ1 289 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CD99L2Q8TCZ2 262 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 GPR151Q8TDV0 419 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 AENQ8WTP8 325 aaKnown RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 DLX4Q92988 240 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 STMN2Q93045 179 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 KIAA1143Q96AT1 154 aaPredicted RBP2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CERS2Q96G23 380 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 PPP1R16AQ96I34 528 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 SERAC1Q96JX3 654 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CAPNS2Q96L46 248 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 OPALINQ96PE5 141 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC29A1Q99808 456 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 P2RY13Q9BPV8 354 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 ACBD6Q9BR61 282 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 DUSP16Q9BY84 665 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 RAB34Q9BZG1 259 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 TM6SF2Q9BZW4 377 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 SLC25A51Q9H1U9 297 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 FBXO44Q9H4M3 255 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 NIPAL2Q9H841 368 aa2.3□□□□□ -2.04
LAPTM4A-202ENST00000483117 CSNK1G1Q9HCP0 422 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms