RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 CCDC153Q494R4 210 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 TSPO2Q5TGU0 170 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CASP12Q6UXS9 341 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 EIF3MQ7L2H7 374 aaKnown RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 LSRQ86X29 649 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 ADGRG3Q86Y34 549 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 DDIASQ8IXT1 998 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 RFLNBQ8N5W9 214 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CCDC63Q8NA47 563 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 OR5AK3PQ8NH89 298 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 PSMA8Q8TAA3 256 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 PIGXQ8TBF5 258 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 SLC25A43Q8WUT9 341 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CCDC106Q9BWC9 280 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 GATA5Q9BWX5 397 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 PLA2G12AQ9BZM1 189 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 OR11A1Q9GZK7 315 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 BPESC1Q9GZL8 116 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 NMUR2Q9GZQ4 415 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 SLC17A5Q9NRA2 495 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CTPS2Q9NRF8 586 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 SLC7A10Q9NS82 523 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 PSMC3IPQ9P2W1 217 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-206ENST00000483030 GIMAP2Q9UG22 337 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 CHRNA9Q9UGM1 479 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 AMDHD2Q9Y303 409 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 DNAJC15Q9Y5T4 150 aa6.45□□□□□ -1.38
CSDE1-206ENST00000483030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.45□□□□□ -1.384e-11■■□□□ 11.6
CSDE1-206ENST00000483030 TMEM229AB2RXF0 380 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM114B3SHH9 223 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM233B4DJY2 109 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 ANKRD28O15084 1053 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 DNPH1O43598 174 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 PEX11AO75192 247 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 BCAS1O75363 584 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 STX11O75558 287 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 UGT2B17O75795 530 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SLU7O95391 586 aaKnown RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 ZNF23P17027 643 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 ITGA2P17301 1181 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 CDH2P19022 906 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 MATN1P21941 496 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 CFPP27918 469 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 CRHR1P34998 444 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SRP14P37108 136 aaKnown RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 RPL3P39023 403 aaKnown RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SNRPD2P62316 118 aaKnown RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 HBA1P69905 142 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 H3F3AP84243 136 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 TGFBR3Q03167 851 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 PTGR1Q14914 329 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 MAPK14Q16539 360 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 WHAMMP3Q1A5X7 153 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 UGT3A2Q3SY77 523 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 HIKESHIQ53FT3 197 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 CCDC92Q53HC0 331 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 KANK2Q63ZY3 851 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 C16orf87Q6PH81 154 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 BHLHB9Q6PI77 547 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 C12orf54Q6X4T0 127 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 RNF165Q6ZSG1 346 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 TRMT10CQ7L0Y3 403 aaKnown RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SLC46A3Q7Z3Q1 461 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 C6orf120Q7Z4R8 191 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SPATA19Q7Z5L4 167 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 JAZF1Q86VZ6 243 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 C10orf107Q8IVU9 208 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 CLEC4FQ8N1N0 589 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 C17orf78Q8N4C9 275 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 KRTCAP2Q8N6L1 136 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 ZNF540Q8NDQ6 660 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 C1orf162Q8NEQ5 155 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 ZNF563Q8TA94 476 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SFXN5Q8TD22 340 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 MOAP1Q96BY2 351 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 COQ8BQ96D53 544 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 ZG16BQ96DA0 208 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 PRPF18Q99633 342 aaKnown RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 C1orf50Q9BV19 199 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SERHL2Q9H4I8 314 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 ATAD3AQ9NVI7 634 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 PARPBPQ9NWS1 579 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 TMEM181Q9P2C4 612 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 TMEFF2Q9UIK5 374 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 TRAPPC4Q9Y296 219 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 HDGFL3Q9Y3E1 203 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 FLVCR1Q9Y5Y0 555 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SPIN1Q9Y657 262 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-206ENST00000483030 PLCE1Q9P212 2302 aa6.44□□□□□ -1.38
CSDE1-206ENST00000483030 SVEP1Q4LDE5 3571 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 DUXAA6NLW8 204 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 B9A039 149 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 PIP5K1BO14986 540 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 SPRY1O43609 319 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 TRIM13O60858 407 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 SKAP2O75563 359 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 LYPLA1O75608 230 aaPredicted RBP6.43□□□□□ -1.38
CSDE1-206ENST00000483030 STAMBPO95630 424 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 WNT11O96014 354 aa6.43□□□□□ -1.38
CSDE1-206ENST00000483030 AK1P00568 194 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms