RNA–Protein interactions for RNA: ENST00000482614.5

EXOSC3-205, Transcript of exosome component 3, humanhuman

TSL 5

Gene EXOSC3, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-205ENST00000482614 NGBQ9NPG2 151 aa13.61□□□□□ -0.23
EXOSC3-205ENST00000482614 RLIMQ9NVW2 624 aa13.61□□□□□ -0.23
EXOSC3-205ENST00000482614 PRSS50Q9UI38 385 aa13.61□□□□□ -0.23
EXOSC3-205ENST00000482614 TEP1Q99973 2627 aaKnown RBP13.61□□□□□ -0.23
EXOSC3-205ENST00000482614 TMEM72A0PK05 275 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 ZNF716A6NP11 495 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 NR5A2O00482 541 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 GPR171O14626 319 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 EIF1BO60739 113 aaKnown RBP13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 GKN3PP0CG01 181 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 HOXB9P17482 250 aaPredicted RBP13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 PPIBP23284 216 aaKnown RBP13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 CXCR1P25024 350 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 COPZ1P61923 177 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 SLC35A1P78382 337 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 SQLEQ14534 574 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 TSC22D1Q15714 1073 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 RPS26P11Q5JNZ5 115 aaPredicted RBP13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 WBP2NLQ6ICG8 309 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 BHLHA15Q7RTS1 189 aaPredicted RBP13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 STON2Q8WXE9 905 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 DNAJA3Q96EY1 480 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 NAA11Q9BSU3 229 aaPredicted RBP13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 BCL2L10Q9HD36 194 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 NOSIPQ9Y314 301 aaKnown RBP13.6□□□□□ -0.23
EXOSC3-205ENST00000482614 RAI1Q7Z5J4 1906 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 C5orf58C9J3I9 102 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 SMPD2O60906 423 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 IMPDH2P12268 514 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 HOXC12P31275 282 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 ACAA2P42765 397 aaKnown RBP13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 SLC16A1P53985 500 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 RIPPLY3P57055 190 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 NKX6-1P78426 367 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 H3F3AP84243 136 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 FOXD4Q12950 439 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 AGKQ53H12 422 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 ZNF311Q5JNZ3 666 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 PAGE3Q5JUK9 113 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 SHEQ5VZ18 495 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 ZNF704Q6ZNC4 412 aaPredicted RBP13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 LRRC75A-AS1Q8N1F1 130 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 CLIP4Q8N3C7 705 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 CADM2Q8N3J6 435 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 BBS10Q8TAM1 723 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 CCL19Q99731 98 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 POTEKPQ9BYX7 375 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 RABEP2Q9H5N1 569 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 SLC52A3Q9NQ40 469 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 SLC25A37Q9NYZ2 338 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 GMEB1Q9Y692 573 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 DSCAMO60469 2012 aa13.59□□□□□ -0.23
EXOSC3-205ENST00000482614 ARHGEF9O43307 516 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 NUDT7P0C024 238 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 NCF2P19878 526 aaPredicted RBP13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 IDUAP35475 653 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 TAB1Q15750 504 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 SSX8Q7RTT4 187 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 CCDC103Q8IW40 242 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 MAL2Q969L2 176 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 SLC35B4Q969S0 331 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 APH1AQ96BI3 265 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 TMEM204Q9BSN7 226 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 ESRP2Q9H6T0 727 aaKnown RBP13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 SLAMF8Q9P0V8 285 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 CORO2BQ9UQ03 480 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 CHST2Q9Y4C5 530 aa13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 ZNF469Q96JG9 3925 aaPredicted RBP13.58□□□□□ -0.24
EXOSC3-205ENST00000482614 ITPR3Q14573 2671 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 A0A1W2PP18 115 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 ZC3H12DA2A288 527 aaKnown RBP13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 EVPLLA8MZ36 301 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 MRPL33O75394 65 aaKnown RBP13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 LYZL6O75951 148 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 PGM3O95394 542 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 PLAUP00749 431 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 GPIP06744 558 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 ARAFP10398 606 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 ETS2P15036 469 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 FOSL1P15407 271 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 COX5AP20674 150 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 IGHV1-2P23083 117 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 EDNRAP25101 427 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 CAPRIN1Q14444 709 aaKnown RBP13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 NCMAPQ5T1S8 102 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 GCNT6Q5T4J0 391 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 FBXW9Q5XUX1 488 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 PAQR6Q6TCH4 344 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 P2RY8Q86VZ1 359 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 P3H2Q8IVL5 708 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 MSRB3Q8IXL7 192 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 UBE2J2Q8N2K1 259 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 PARPBPQ9NWS1 579 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 VAPAQ9P0L0 249 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 TRIM33Q9UPN9 1127 aa13.57□□□□□ -0.24
EXOSC3-205ENST00000482614 PRR14LQ5THK1 2151 aa13.56□□□□□ -0.24
EXOSC3-205ENST00000482614 TRBV5-3A0A0A0MS03 114 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms