RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 TMEM120AQ9BXJ8 343 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 ADAM19Q9H013 955 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 TMEM38AQ9H6F2 299 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 CCM2LQ9NUG4 571 aaPredicted RBP10.56□□□□□ -0.72
HMGN1-213ENST00000482192 MRGBPQ9NV56 204 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 PLEKHA6Q9Y2H5 1048 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 DCHS2Q6V1P9 2916 aa10.56□□□□□ -0.72
HMGN1-213ENST00000482192 GPR171O14626 319 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 SIAH2O43255 324 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 EIF1BO60739 113 aaKnown RBP10.55□□□□□ -0.72
HMGN1-213ENST00000482192 GCM2O75603 506 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-213ENST00000482192 CNOT4O95628 575 aaKnown RBP10.55□□□□□ -0.72
HMGN1-213ENST00000482192 ARAFP10398 606 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 PRG2P13727 222 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 CXCR1P25024 350 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 PRKAR1BP31321 381 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 OR2B6P58173 313 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 SFRP5Q5T4F7 317 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 DLEU7Q6UYE1 221 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 Q6ZT83 130 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 C22orf34Q6ZV56 151 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 DHDDSQ86SQ9 333 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 SERPINA11Q86U17 422 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF100Q8IYN0 542 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 C10orf111Q8N326 155 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 DPP10Q8N608 796 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 S100PBPQ96BU1 408 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 MBD6Q96DN6 1003 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 DNAJA3Q96EY1 480 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
HMGN1-213ENST00000482192 CPPED1Q9BRF8 314 aaPredicted RBP10.55□□□□□ -0.72
HMGN1-213ENST00000482192 SPATA5L1Q9BVQ7 753 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 IKZF5Q9H5V7 419 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 CHST2Q9Y4C5 530 aa10.55□□□□□ -0.72
HMGN1-213ENST00000482192 A0A1W2PPR1 153 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ZC3H12DA2A288 527 aaKnown RBP10.54□□□□□ -0.72
HMGN1-213ENST00000482192 PRORSD1PA6NEY8 169 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF716A6NP11 495 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF814B7Z6K7 855 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ATE1O95260 518 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ADAP00813 363 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 THBDP07204 575 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 IMPDH2P12268 514 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 FPR1P21462 350 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 SLC6A2P23975 617 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 IL32P24001 234 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 IDUAP35475 653 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 SLC16A1P53985 500 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 NR1H2P55055 460 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 H3F3AP84243 136 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ITGADQ13349 1161 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 SCARB2Q14108 478 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 RUNDC3AQ59EK9 446 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 BEX5Q5H9J7 111 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 RETREG3Q86VR2 466 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 KISS1RQ969F8 398 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-213ENST00000482192 APH1AQ96BI3 265 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF775Q96BV0 537 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ANKRD27Q96NW4 1050 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 ALPK1Q96QP1 1244 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 NAA11Q9BSU3 229 aaPredicted RBP10.54□□□□□ -0.72
HMGN1-213ENST00000482192 POTEKPQ9BYX7 375 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 CXXC4Q9H2H0 198 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 MED4Q9NPJ6 270 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 FGFR1OP2Q9NVK5 253 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 NOSIPQ9Y314 301 aaKnown RBP10.54□□□□□ -0.72
HMGN1-213ENST00000482192 POLQO75417 2590 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 OTOGQ6ZRI0 2925 aa10.54□□□□□ -0.72
HMGN1-213ENST00000482192 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
HMGN1-213ENST00000482192 A8MVM7 634 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 FRS3O43559 492 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 SERPINB7O75635 380 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 GPIP06744 558 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 VIMP08670 466 aaKnown RBP10.53□□□□□ -0.72
HMGN1-213ENST00000482192 ARFIP2P53365 341 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 NFYCQ13952 458 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 ADRM1Q16186 407 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 CYP51A1Q16850 503 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 DHRS4L2Q6PKH6 230 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 PAQR6Q6TCH4 344 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 WFDC8Q8IUA0 241 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 CCDC103Q8IW40 242 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 C11orf65Q8NCR3 313 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 HIPK4Q8NE63 616 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 BHLHE22Q8NFJ8 381 aaPredicted RBP10.53□□□□□ -0.72
HMGN1-213ENST00000482192 C3orf49Q96BT1 292 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 HS3ST6Q96QI5 342 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 ZNF607Q96SK3 696 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 CGREF1Q99674 301 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 PRSS50Q9UI38 385 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 ANGPT4Q9Y264 503 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 SLC9A8Q9Y2E8 581 aa10.53□□□□□ -0.72
HMGN1-213ENST00000482192 HEATR5AQ86XA9 2040 aa10.52□□□□□ -0.73
HMGN1-213ENST00000482192 ANKRD17O75179 2603 aaKnown RBP10.52□□□□□ -0.73
HMGN1-213ENST00000482192 LIPT2A6NK58 231 aa10.52□□□□□ -0.73
HMGN1-213ENST00000482192 KLF4O43474 513 aa10.52□□□□□ -0.73
HMGN1-213ENST00000482192 RAMP1O60894 148 aa10.52□□□□□ -0.73
HMGN1-213ENST00000482192 MRPL33O75394 65 aaKnown RBP10.52□□□□□ -0.73
HMGN1-213ENST00000482192 COX5AP20674 150 aa10.52□□□□□ -0.73
HMGN1-213ENST00000482192 EDNRAP25101 427 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms