RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 PDZK1Q5T2W1 519 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 C1QL2Q7Z5L3 287 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 CDK20Q8IZL9 346 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 POMGNT2Q8NAT1 580 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 CKAP2Q8WWK9 683 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 BOD1Q96IK1 185 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 ACTRT3Q9BYD9 372 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 ACSS3Q9H6R3 686 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 MID1IP1Q9NPA3 183 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 RRAGDQ9NQL2 400 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-224ENST00000481929 CTPS2Q9NRF8 586 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 TMEM45AQ9NWC5 275 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 TREM2Q9NZC2 230 aa12.92□□□□□ -0.34
HDAC6-224ENST00000481929 FAF1Q9UNN5 650 aaPredicted RBP12.92□□□□□ -0.34
HDAC6-224ENST00000481929 UTP11Q9Y3A2 253 aaKnown RBP12.92□□□□□ -0.34
HDAC6-224ENST00000481929 TMEM129A0AVI4 362 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 ANKRD28O15084 1053 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 ZSCAN12O43309 604 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 SEC22BO75396 215 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 KRT16P08779 473 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 IGFBP1P08833 259 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-224ENST00000481929 EFNA1P20827 205 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-224ENST00000481929 CLK1P49759 484 aaKnown RBP12.91□□□□□ -0.34
HDAC6-224ENST00000481929 SERPINB9P50453 376 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 HGFACQ04756 655 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 TRIM46Q7Z4K8 759 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 CARM1Q86X55 608 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 CCDC106Q9BWC9 280 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 OR11A1Q9GZK7 315 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 RACGAP1Q9H0H5 632 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 UNKLQ9H9P5 680 aaKnown RBP12.91□□□□□ -0.34
HDAC6-224ENST00000481929 MOV10Q9HCE1 1003 aaKnown RBP12.91□□□□□ -0.34
HDAC6-224ENST00000481929 SIRT3Q9NTG7 399 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-224ENST00000481929 CRNNQ9UBG3 495 aaPredicted RBP12.91□□□□□ -0.34
HDAC6-224ENST00000481929 PTGDR2Q9Y5Y4 395 aa12.91□□□□□ -0.34
HDAC6-224ENST00000481929 NPIPB8E9PQR5 432 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 EIF1BO60739 113 aaKnown RBP12.9□□□□□ -0.34
HDAC6-224ENST00000481929 SKAP2O75563 359 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-224ENST00000481929 KRT33AO76009 404 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 CSTAP01040 98 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 AVPP01185 164 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 UBTFL6P0CB48 400 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-224ENST00000481929 ATP5F1P24539 256 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-224ENST00000481929 FKBP2P26885 142 aaKnown RBP12.9□□□□□ -0.34
HDAC6-224ENST00000481929 H3F3AP84243 136 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 TP53BP2Q13625 1128 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 SLC17A1Q14916 467 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 ZDHHC24Q6UX98 284 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 SLC22A9Q8IVM8 553 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 OR1K1Q8NGR3 316 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 ZNF563Q8TA94 476 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 TMEM45BQ96B21 275 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 METTL2AQ96IZ6 378 aaKnown RBP12.9□□□□□ -0.34
HDAC6-224ENST00000481929 CCT7Q99832 543 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 NAA11Q9BSU3 229 aaPredicted RBP12.9□□□□□ -0.34
HDAC6-224ENST00000481929 SEC61A2Q9H9S3 476 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 NTN4Q9HB63 628 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 SLC52A3Q9NQ40 469 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 G6PC2Q9NQR9 355 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 TMEM181Q9P2C4 612 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 TRAPPC4Q9Y296 219 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 PPIAL4AQ9Y536 164 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 KCNE3Q9Y6H6 103 aa12.9□□□□□ -0.34
HDAC6-224ENST00000481929 ARPC4-TTLL3A0A0A6YYG9 625 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 TRIM49D1C9J1S8 452 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 CRCPO75575 148 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 LGI1O95970 557 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 IGLV1-44P01699 117 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 ANPEPP15144 967 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 ACHEP22303 614 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 ZFP36P26651 326 aaKnown RBP12.89□□□□□ -0.35
HDAC6-224ENST00000481929 ASMTP46597 345 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 PRKAA2P54646 552 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 TUBA1BP68363 451 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 TUBA4AP68366 448 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 SLC35A1P78382 337 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 MYBPC1Q00872 1141 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 POU3F1Q03052 451 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-224ENST00000481929 PDE7AQ13946 482 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 SLC9B1Q4ZJI4 515 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 ELFN2Q5R3F8 820 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 TUBA1AQ71U36 451 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 AAED1Q7RTV5 226 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 OR56A1Q8NGH5 318 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 CLHC1Q8NHS4 586 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 NANPQ8TBE9 248 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 L3HYPDHQ96EM0 354 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 AURKBQ96GD4 344 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-224ENST00000481929 TSSK3Q96PN8 268 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF317Q96PQ6 595 aaPredicted RBP12.89□□□□□ -0.35
HDAC6-224ENST00000481929 PAFAH2Q99487 392 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 NMUR2Q9GZQ4 415 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 RAB17Q9H0T7 212 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 MED29Q9NX70 200 aa12.89□□□□□ -0.35
HDAC6-224ENST00000481929 WNK2Q9Y3S1 2297 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 A0A0G2JMP0 313 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 A0A0X1KG70 313 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 OR6C65A6NJZ3 312 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 ZNF587BE7ETH6 402 aa12.88□□□□□ -0.35
HDAC6-224ENST00000481929 NR5A2O00482 541 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms