RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 PRODHO43272 600 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 HLA-DPB1P04440 258 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 WNT1P04628 370 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 APODP05090 189 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 EIF4EP06730 217 aaKnown RBP9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 NBEAP1P0C6P0 100 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 GZMBP10144 247 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 HSD11B1P28845 292 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 CEBPGP53567 150 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 H2BFSP57053 126 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 RHEBQ15382 184 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 C10orf120Q5SQS8 335 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 CBLL1Q75N03 491 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 GOLGA7Q7Z5G4 137 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 PXKQ7Z7A4 578 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 VRK2Q86Y07 508 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 CACUL1Q86Y37 369 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 JAGN1Q8N5M9 183 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 OR7G2Q8NG99 324 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 OR10G2Q8NGC3 310 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 OR52B6Q8NGF0 335 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 WFDC12Q8WWY7 111 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 CMBLQ96DG6 245 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 OR2M4Q96R27 311 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 DIRC2Q96SL1 478 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 NUDT16L1Q9BRJ7 211 aaKnown RBP9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 C11orf84Q9BUA3 381 aaPredicted RBP9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 CD84Q9UIB8 345 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 SLC25A13Q9UJS0 675 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 FAM96BQ9Y3D0 163 aa9.61□□□□□ -0.87
PRPF4B-206ENST00000481109 IGKV6D-41A0A0C4DH26 115 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 TEX13DA0A0J9YY54 714 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 C2CD4BA6NLJ0 364 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 DPYSL4O14531 572 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SUV39H1O43463 412 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 OR1I1O60431 355 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 CILPO75339 1184 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 PSMD10O75832 226 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 CYB5R3P00387 301 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 GCGP01275 180 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 JCHAINP01591 159 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SRPRAP08240 638 aaKnown RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SOD3P08294 240 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 IL6RP08887 468 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 NR2F6P10588 404 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 UROSP10746 265 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 PPIGQ13427 754 aaKnown RBP eCLIP9.6□□□□□ -0.874e-7■■■□□ 16.8
PRPF4B-206ENST00000481109 VEZF1Q14119 521 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 DOK7Q18PE1 504 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ZDHHC20Q5W0Z9 365 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 WDR88Q6ZMY6 472 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 FAM26EQ8N5C1 309 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 NEIL3Q8TAT5 605 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 WDR92Q96MX6 357 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 P2RX7Q99572 595 aaKnown RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 PCBD2Q9H0N5 130 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 PLEKHA1Q9HB21 404 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 MSL2Q9HCI7 577 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 FTSJ1Q9UET6 329 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 USP3Q9Y6I4 520 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SRCAPQ6ZRS2 3230 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ANKRD12Q6UB98 2062 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 C20orf202A1L168 122 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 RNASEK-C17orf49H0YIS7 233 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 MAGEB4O15481 346 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ENTPD6O75354 484 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 DIRAS1O95057 198 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 WISP3O95389 354 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ICAM1P05362 532 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ERCC1P07992 297 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 TAF6P49848 677 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 PTTG1IPP53801 180 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SLC37A1P57057 533 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ARF6P62330 175 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 RING1Q06587 406 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 PTGES3Q15185 160 aaKnown RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SLC10A6Q3KNW5 377 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 CRY2Q49AN0 593 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 LRIF1Q5T3J3 769 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 KCTD11Q693B1 232 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ZNF529Q6P280 563 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 TMIGD1Q6UXZ0 262 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 GALNTL5Q7Z4T8 443 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 LDB1Q86U70 411 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ZNF546Q86UE3 836 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 FAM24BQ8N5W8 94 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 ZBTB2Q8N680 514 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SLC5A8Q8N695 610 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 C2CD4AQ8NCU7 369 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 OR4F15Q8NGB8 312 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 LRRN4Q8WUT4 740 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 TRAPPC12Q8WVT3 735 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 OR8D1Q8WZ84 308 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 WDR89Q96FK6 387 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 WDR13Q9H1Z4 485 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SPG21Q9NZD8 308 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 BTAF1O14981 1849 aa9.6□□□□□ -0.87
PRPF4B-206ENST00000481109 SERTM2A0A1B0GWG4 89 aa9.59□□□□□ -0.87
PRPF4B-206ENST00000481109 LRRC14BA6NHZ5 514 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms