RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 POTEKPQ9BYX7 375 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 SELENONQ9NZV5 590 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 ACTR3BQ9P1U1 418 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 MCTS1Q9ULC4 181 aaKnown RBP17.7■□□□□ 0.42
LIME1-205ENST00000480139 TRAPPC4Q9Y296 219 aa17.7■□□□□ 0.42
LIME1-205ENST00000480139 ELOA3DA6NLF2 546 aaPredicted RBP17.69■□□□□ 0.42
LIME1-205ENST00000480139 CHP2O43745 196 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 NPIPB7O75200 414 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 RCBTB2O95199 551 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 TGM6O95932 706 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 IL2RAP01589 272 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 TFPIP10646 304 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 MSX2P35548 267 aaPredicted RBP17.69■□□□□ 0.42
LIME1-205ENST00000480139 MYBPHQ13203 477 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 TRIM25Q14258 630 aaKnown RBP17.69■□□□□ 0.42
LIME1-205ENST00000480139 ZNF239Q16600 458 aaKnown RBP17.69■□□□□ 0.42
LIME1-205ENST00000480139 ELOA3BQ3SY89 546 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 IFI44LQ53G44 452 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 OR2A2Q6IF42 318 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 XKRXQ6PP77 449 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 C5orf46Q6UWT4 87 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 VTCN1Q7Z7D3 282 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 C9orf106Q8NAJ2 232 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 ELOA3Q8NG57 546 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 FNDC9Q8TBE3 224 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 ITLN2Q8WWU7 325 aaPredicted RBP17.69■□□□□ 0.42
LIME1-205ENST00000480139 ASB5Q8WWX0 329 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 HSH2DQ96JZ2 352 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 ARL5BQ96KC2 179 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 NSMCE2Q96MF7 247 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 THTPAQ9BU02 230 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 OR11A1Q9GZK7 315 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 RNF122Q9H9V4 155 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 COQ3Q9NZJ6 369 aa17.69■□□□□ 0.42
LIME1-205ENST00000480139 A0A087WUJ7 227 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 A0A0G2JNJ9 132 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 A0A1W2PNR3 127 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 TRAPPC13A5PLN9 417 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 SULT2B1O00204 365 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 SYNGR4O95473 234 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 IFNW1P05000 195 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 CRHP06850 196 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 CCNA2P20248 432 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 TNFRSF1BP20333 461 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 OR1E2P47887 323 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 DIO1P49895 249 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 CDH12P55289 794 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 MTX3Q5HYI7 312 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 LINC00114Q6XXX2 140 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 P4HA3Q7Z4N8 544 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 MRGPRGQ86SM5 289 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 OR10Q1Q8NGQ4 319 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 ASB9Q96DX5 294 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 SRXN1Q9BYN0 137 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 Q9UFV3 132 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 RNF6Q9Y252 685 aa17.68■□□□□ 0.42
LIME1-205ENST00000480139 ZC3H12DA2A288 527 aaKnown RBP17.67■□□□□ 0.42
LIME1-205ENST00000480139 CPSF4LA6NMK7 179 aaKnown RBP17.67■□□□□ 0.42
LIME1-205ENST00000480139 DNAJC8O75937 253 aaPredicted RBP17.67■□□□□ 0.42
LIME1-205ENST00000480139 PDE5AO76074 875 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 OR5F1O95221 314 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 THRBP10828 461 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 CHRNB4P30926 498 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 EEF1A1P5Q5VTE0 462 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 LCN8Q6JVE9 175 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 PGM2L1Q6PCE3 622 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 DEF8Q6ZN54 512 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 FKBP9P1Q75LS8 142 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 TSPYL5Q86VY4 417 aaPredicted RBP17.67■□□□□ 0.42
LIME1-205ENST00000480139 MED12LQ86YW9 2145 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 NAXEQ8NCW5 288 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 RNF128Q8TEB7 428 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 POP5Q969H6 163 aaKnown RBP17.67■□□□□ 0.42
LIME1-205ENST00000480139 MPP4Q96JB8 637 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 TMEM43Q9BTV4 400 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 AMBRA1Q9C0C7 1298 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 ZNF629Q9UEG4 869 aaPredicted RBP17.67■□□□□ 0.42
LIME1-205ENST00000480139 MPDZO75970 2070 aa17.67■□□□□ 0.42
LIME1-205ENST00000480139 FZD7O75084 574 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 AQP8O94778 261 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 LYPD3O95274 346 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 IL18BPO95998 194 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 THY1P04216 161 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 RNF224P0DH78 156 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 IDUAP35475 653 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 AGFG1P52594 562 aaKnown RBP17.66■□□□□ 0.42
LIME1-205ENST00000480139 EGR4Q05215 589 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 C1orf140Q5VVS0 124 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 PLXDC2Q6UX71 529 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 SLC43A2Q8N370 569 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 SDCCAG3Q96C92 435 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 ZHX1-C8orf76Q96EF9 292 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 PRRC1Q96M27 445 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 ZNF426Q9BUY5 554 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 SFXN3Q9BWM7 321 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 PRRG4Q9BZD6 226 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 GP6Q9HCN6 339 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 GLRX2Q9NS18 164 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 PCNX1Q96RV3 2341 aa17.66■□□□□ 0.42
LIME1-205ENST00000480139 IGKV1D-42A0A075B6H8 117 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms