RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 OR2T1O43869 369 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 SLC22A5O76082 557 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 CD3GP09693 182 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 GIFP27352 417 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 ARF1P84077 181 aaKnown RBP13.31□□□□□ -0.28
COL20A1-206ENST00000479501 MFSD13AQ14CX5 517 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 DUSP5Q16690 384 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 RNASE10Q5GAN6 216 aaKnown RBP13.31□□□□□ -0.28
COL20A1-206ENST00000479501 TMEM196Q5HYL7 178 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 WBP2NLQ6ICG8 309 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 ALKBH2Q6NS38 261 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 FAHD1Q6P587 224 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 LYSMD2Q8IV50 215 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 FAM174AQ8TBP5 190 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 HIST1H2AAQ96QV6 131 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 EIF5A2Q9GZV4 153 aaKnown RBP13.31□□□□□ -0.28
COL20A1-206ENST00000479501 SEMA6CQ9H3T2 930 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 ZNF576Q9H609 170 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 CUTCQ9NTM9 273 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 ZNF337Q9Y3M9 751 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 TNS1Q9HBL0 1735 aaKnown RBP13.31□□□□□ -0.28
COL20A1-206ENST00000479501 CXCL12P48061 93 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 WNT3P56703 355 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 TRMT12Q53H54 448 aaKnown RBP13.31□□□□□ -0.28
COL20A1-206ENST00000479501 MANEAQ5SRI9 462 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 HES5Q5TA89 166 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 PRICKLE2Q7Z3G6 844 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 PATE1Q8WXA2 126 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 NECAB3Q96P71 396 aaPredicted RBP13.31□□□□□ -0.28
COL20A1-206ENST00000479501 TNFRSF13CQ96RJ3 184 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 SRPK3Q9UPE1 567 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 A6NL46 340 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 AGAP14A8MT82 685 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 LAMTOR5O43504 91 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 ICMTO60725 284 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 PRAF2O60831 178 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 WISP3O95389 354 aaPredicted RBP13.31□□□□□ -0.28
COL20A1-206ENST00000479501 GABRA5P31644 462 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 PSMB10P40306 273 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 PPP2CBP62714 309 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 PPP2CAP67775 309 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 KRBOX4Q5JUW0 171 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 NXNL2Q5VZ03 156 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 TMEM205Q6UW68 189 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 CAMKMTQ7Z624 323 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 CCL4L1Q8NHW4 92 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 FGF14Q92915 247 aa13.31□□□□□ -0.28
COL20A1-206ENST00000479501 A0A1B0GWA3 101 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 CDC14CA4D256 554 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ANKRD34BA5PLL1 514 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 HMGB3O15347 200 aaKnown RBP13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ADH6P28332 368 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 EMP2P54851 167 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 SGCAQ16586 387 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 C9orf50Q5SZB4 431 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ANKRD53Q8N9V6 530 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 OR52I1Q8NGK6 324 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ZNF566Q969W8 418 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 CRB3Q9BUF7 120 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 FTSJ1Q9UET6 329 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 GABRPO00591 440 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 PPM1DO15297 605 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ZNF208O43345 1280 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 IDUAP35475 653 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 TRIM23P36406 574 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 PBX2P40425 430 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 PLEKHN1Q494U1 663 aaPredicted RBP13.3□□□□□ -0.28
COL20A1-206ENST00000479501 LINC00299Q6ZSB3 139 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 USP51Q70EK9 711 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 NKAIN4Q8IVV8 208 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 FBXL6Q8N531 539 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 UBQLN3Q9H347 655 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 TXNL4BQ9NX01 149 aaKnown RBP13.3□□□□□ -0.28
COL20A1-206ENST00000479501 RASD1Q9Y272 281 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 TVP23AA6NH52 213 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ARPC1BO15143 372 aaKnown RBP13.3□□□□□ -0.28
COL20A1-206ENST00000479501 CSO75390 466 aaKnown RBP13.3□□□□□ -0.28
COL20A1-206ENST00000479501 CSNK1EP49674 416 aaKnown RBP13.3□□□□□ -0.28
COL20A1-206ENST00000479501 CAV3P56539 151 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ZFPM2Q8WW38 1151 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 C7orf50Q9BRJ6 194 aaKnown RBP13.3□□□□□ -0.28
COL20A1-206ENST00000479501 LYRM4Q9HD34 91 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 DUSP22Q9NRW4 184 aa13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ATXN7L1Q9ULK2 861 aaPredicted RBP13.3□□□□□ -0.28
COL20A1-206ENST00000479501 ZAR1LA6NP61 321 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 WASHC1A8K0Z3 465 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 B8ZZF3 427 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 IGFBP1P08833 259 aaPredicted RBP13.29□□□□□ -0.28
COL20A1-206ENST00000479501 JMJD7P0C870 316 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 TEAD1P28347 426 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 ZNF616Q08AN1 781 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 LAX1Q8IWV1 398 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 MRGPRX1Q96LB2 322 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 PRDM9Q9NQV7 894 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 BIN3Q9NQY0 253 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 SEMA4GQ9NTN9 838 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 KNTC1P50748 2209 aa13.29□□□□□ -0.28
COL20A1-206ENST00000479501 ASCC3Q8N3C0 2202 aaKnown RBP13.29□□□□□ -0.28
COL20A1-206ENST00000479501 METTL15A6NJ78 407 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms