RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 NTNG2Q96CW9 530 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 NRBF2Q96F24 287 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 SLC41A3Q96GZ6 507 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 CCNL2Q96S94 520 aaPredicted RBP6.05□□□□□ -1.44
USP48-208ENST00000479177 BARD1Q99728 777 aaKnown RBP6.05□□□□□ -1.44
USP48-208ENST00000479177 SLC29A1Q99808 456 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 KLHDC3Q9BQ90 382 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 PSD2Q9BQI7 771 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 ZNF559Q9BR84 538 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 FNDC11Q9BVV2 318 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 OSBPL11Q9BXB4 747 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 DPH1Q9BZG8 443 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 TRIM2Q9C040 744 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 KLHL4Q9C0H6 718 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 VCX3BQ9H321 246 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 ANKRD19PQ9H560 264 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 METTL7AQ9H8H3 244 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 NMNAT1Q9HAN9 279 aaPredicted RBP6.05□□□□□ -1.44
USP48-208ENST00000479177 CPNE5Q9HCH3 593 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 GALNT9Q9HCQ5 603 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 CTPS2Q9NRF8 586 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 ACER3Q9NUN7 267 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 HPF1Q9NWY4 346 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 KLRF1Q9NZS2 232 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 RHCGQ9UBD6 479 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 TEKT2Q9UIF3 430 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 CNOT11Q9UKZ1 510 aaKnown RBP6.05□□□□□ -1.44
USP48-208ENST00000479177 ICAM5Q9UMF0 924 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 CARD8Q9Y2G2 431 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 MAGED1Q9Y5V3 778 aaPredicted RBP6.05□□□□□ -1.44
USP48-208ENST00000479177 WIF1Q9Y5W5 379 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 U3KQV3 271 aa6.05□□□□□ -1.44
USP48-208ENST00000479177 MED12Q93074 2177 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ZZEF1O43149 2961 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ATRXP46100 2492 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 CFAP47Q6ZTR5 3102 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 A0A0G2JMM0 328 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 A0A1W2PPB8 328 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 A0A1W2PRS3 328 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ANKUB1A6NFN9 424 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 KIR3DP1A8MWS1 328 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 G3V2T6 193 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 CYP7B1O75881 506 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 NTN1O95631 604 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 HPRP00739 348 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ALPLP05186 524 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 THRBP10828 461 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 UQCRBP14927 111 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ZNF26P17031 533 aaPredicted RBP6.04□□□□□ -1.44
USP48-208ENST00000479177 CBLP22681 906 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 FPR2P25090 351 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 RYKP34925 604 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 CASP3P42574 277 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 SLC6A8P48029 635 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 CLK3P49761 638 aaKnown RBP6.04□□□□□ -1.44
USP48-208ENST00000479177 ALDH3A2P51648 485 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 CCR4P51679 360 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 AQP4P55087 323 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 LINC00310P59036 64 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 PPP2R2BQ00005 443 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ST3GAL3Q11203 375 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 MFAP5Q13361 173 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 TUBA3CQ13748 450 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 DAG1Q14118 895 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 TRAM2Q15035 370 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 SEC23BQ15437 767 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 COL28A1Q2UY09 1125 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 SLC35F1Q5T1Q4 408 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 OTUD3Q5T2D3 398 aaPredicted RBP6.04□□□□□ -1.44
USP48-208ENST00000479177 ABHD17BQ5VST6 288 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 PRAMEF20Q5VT98 475 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ZNF770Q6IQ21 691 aaPredicted RBP6.04□□□□□ -1.44
USP48-208ENST00000479177 PPP4R4Q6NUP7 873 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 SLC30A6Q6NXT4 461 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 FAHD1Q6P587 224 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 TUBA3EQ6PEY2 450 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 PODNL1Q6PEZ8 512 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 TBPL2Q6SJ96 375 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 WDR88Q6ZMY6 472 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ZBTB49Q6ZSB9 765 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 GDF7Q7Z4P5 450 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 STK32CQ86UX6 486 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 CYP4Z2PQ8N1L4 340 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 LSMEM1Q8N8F7 131 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 OR10G2Q8NGC3 310 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 OR52J3Q8NH60 311 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 OR5W2Q8NH69 310 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 B4GALNT2Q8NHY0 566 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 SLC7A13Q8TCU3 470 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ADAMTS16Q8TE57 1224 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 C3orf49Q96BT1 292 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ZNF524Q96C55 264 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 SDCCAG3Q96C92 435 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 SH3YL1Q96HL8 342 aaPredicted RBP6.04□□□□□ -1.44
USP48-208ENST00000479177 SGCZQ96LD1 299 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 TACO1Q9BSH4 297 aaKnown RBP6.04□□□□□ -1.44
USP48-208ENST00000479177 ANGPTL4Q9BY76 406 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 ING2Q9H160 280 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 VCXQ9H320 206 aa6.04□□□□□ -1.44
USP48-208ENST00000479177 COQ10BQ9H8M1 238 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms