RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 F5H0A9 414 aaPredicted RBP19.63■□□□□ 0.73
SDF4-206ENST00000478938 CLDN11O75508 207 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 POP4O95707 220 aaKnown RBP19.63■□□□□ 0.73
SDF4-206ENST00000478938 C8GP07360 202 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 GPR4P46093 362 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 C10orf120Q5SQS8 335 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 TMEM69Q5SWH9 247 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 C1orf216Q8TAB5 229 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 ZNF607Q96SK3 696 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 NRIP2Q9BQI9 281 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 MAGEH1Q9H213 219 aa19.63■□□□□ 0.73
SDF4-206ENST00000478938 RCC2Q9P258 522 aaKnown RBP19.63■□□□□ 0.73
SDF4-206ENST00000478938 LOC390937A0A1W2PQ73 354 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 HMGN4O00479 90 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 CLDN7O95471 211 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 HPGDP15428 266 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 HSD3B2P26439 372 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 DLSTP36957 453 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 RPS24P62847 133 aaKnown RBP19.62■□□□□ 0.73
SDF4-206ENST00000478938 TRAM1Q15629 374 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 GLT8D1Q68CQ7 371 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 C6orf120Q7Z4R8 191 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 ADCK2Q7Z695 626 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 NXPE1Q8N323 547 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 LINC00471Q8N535 108 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 BRI3BPQ8WY22 251 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 TGIF2Q9GZN2 237 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 KLHL31Q9H511 634 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 TRAV1-2A0A0B4J238 106 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 TRBV5-4A0A0C4DH59 114 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 ZNF749O43361 778 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 KDELR3O43731 214 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 UGDHO60701 494 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 B4GALT2O60909 372 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 KLHL18O94889 574 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 CD2P06729 351 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 NRG3P56975 720 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 IRF4Q15306 451 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 FIGNL1Q6PIW4 674 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 SAMD7Q7Z3H4 446 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 LURAP1Q96LR2 239 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 PRRC1Q96M27 445 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 HCAR1Q9BXC0 346 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 TAAR2Q9P1P5 351 aa19.62■□□□□ 0.73
SDF4-206ENST00000478938 PRAMEF27A3QJZ7 478 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 FGF16O43320 207 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 B3GAT3O94766 335 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 IL3P08700 152 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 COX5BP10606 129 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 PYCR1P32322 319 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 CXADRP78310 365 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 ELAVL1Q15717 326 aaKnown RBP19.61■□□□□ 0.73
SDF4-206ENST00000478938 OR4C16Q8NGL9 310 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 CPNE4Q96A23 557 aaPredicted RBP19.61■□□□□ 0.73
SDF4-206ENST00000478938 TMEM169Q96HH4 297 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 ZFYVE1Q9HBF4 777 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 ZFP37Q9Y6Q3 630 aaPredicted RBP19.61■□□□□ 0.73
SDF4-206ENST00000478938 hCG_1809904A0A1W2PP81 198 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 A0A1W2PR64 198 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 A0A1W2PRV1 198 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 CDHR4A6H8M9 788 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 OR5H14A6NHG9 310 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 OR2AT4A6NND4 320 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 AP4M1O00189 453 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 KCNAB3O43448 404 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 FRS3O43559 492 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 LILRB5O75023 590 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 OR2F2O95006 317 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 ALPPL2P10696 532 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 NME1P15531 152 aaKnown RBP19.61■□□□□ 0.73
SDF4-206ENST00000478938 ADCYAP1R1P41586 468 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 CAP1Q01518 475 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 OR2F1Q13607 317 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 HENMT1Q5T8I9 393 aaKnown RBP19.61■□□□□ 0.73
SDF4-206ENST00000478938 PIP5KL1Q5T9C9 394 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 FAM71E1Q6IPT2 247 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 THEM5Q8N1Q8 247 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 PMM1Q92871 262 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 FOXJ3Q9UPW0 622 aa19.61■□□□□ 0.73
SDF4-206ENST00000478938 C17orf113A0A1B0GUU1 675 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 F5H5T6 163 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 TGFB1P01137 390 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 RHOP08100 348 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 GJA5P36382 358 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 MNDAP41218 407 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 SLC16A1P53985 500 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 OR2B8PP59922 312 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 B4GALNT1Q00973 533 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 TAF13Q15543 124 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 OR7A5Q15622 319 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 RPL13AP3Q6NVV1 102 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 CRTC1Q6UUV9 634 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 TEX19Q8NA77 164 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 STOML3Q8TAV4 291 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 NUBPLQ8TB37 319 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 KLK6Q92876 244 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 ISOC2Q96AB3 205 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 NEURL3Q96EH8 262 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 HS6ST2Q96MM7 605 aa19.6■□□□□ 0.73
SDF4-206ENST00000478938 OR14A2Q96R54 314 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms