RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SMAD5-AS1Q9Y6J3 95 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 AGRNO00468 2067 aa3.91□□□□□ -1.78
CCDC171-207ENST00000478913 SPTY2D1-AS1A0A0U1RR47 76 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 C5orf51A6NDU8 294 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 RPL37AP8A6NKH3 93 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 HIP1O00291 1037 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 DYNC1I1O14576 645 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 KIAA0754O94854 1291 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 MT-ND1P03886 318 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 OR9G9P0C7N8 305 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 RBMY1CP0DJD4 496 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 CYP3A5P20815 502 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 PTPN4P29074 926 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 CHRNA3P32297 505 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 CASP3P42574 277 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 PSMD8P48556 350 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 NUCB2P80303 420 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 C17orf67Q0P5P2 114 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 UBE2SQ16763 222 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 TMEM44Q2T9K0 475 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 TMEM215Q68D42 235 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 GCNT7Q6ZNI0 430 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 SYVN1Q86TM6 617 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 ZNF781Q8N8C0 355 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 CATSPER1Q8NEC5 780 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 OR6M1Q8NGM8 313 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 RNASE8Q8TDE3 154 aaKnown RBP3.9□□□□□ -1.79
CCDC171-207ENST00000478913 GLYATL1Q969I3 302 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 ELMO2Q96JJ3 720 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 CXorf58Q96LI9 332 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 HSD17B14Q9BPX1 270 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 DCTN5Q9BTE1 182 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 RSPH9Q9H1X1 276 aaPredicted RBP3.9□□□□□ -1.79
CCDC171-207ENST00000478913 NT5DC2Q9H857 520 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 ZCCHC3Q9NUD5 404 aaKnown RBP3.9□□□□□ -1.79
CCDC171-207ENST00000478913 TECRQ9NZ01 308 aaKnown RBP3.9□□□□□ -1.79
CCDC171-207ENST00000478913 SPATA2Q9UM82 520 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 RNF6Q9Y252 685 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 FBXO7Q9Y3I1 522 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 SNX5Q9Y5X3 404 aa3.9□□□□□ -1.79
CCDC171-207ENST00000478913 TEX48A0A1B0GUV7 120 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 SRRM5B3KS81 715 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 SH3BGRLO75368 114 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 GOSR1O95249 250 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 AKT2P31751 481 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 NUDT1P36639 197 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 GEMP55040 296 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 MLF1P58340 268 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 RPS15P62841 145 aaKnown RBP3.89□□□□□ -1.79
CCDC171-207ENST00000478913 GK2Q14410 553 aaPredicted RBP3.89□□□□□ -1.79
CCDC171-207ENST00000478913 KRT31Q15323 416 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 TRADDQ15628 312 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 CLEC12BQ2HXU8 276 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 FAM120AOSQ5T036 256 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 TPRG1LQ5T0D9 272 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 DDI2Q5TDH0 399 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 LEMD1Q68G75 181 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 SPINK14Q6IE38 97 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 ZNF774Q6NX45 483 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 LRRC49Q8IUZ0 686 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 FBXW8Q8N3Y1 598 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 SAMD12Q8N8I0 201 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 OR1K1Q8NGR3 316 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 OR4L1Q8NH43 312 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 SPPL2BQ8TCT7 592 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 PHF10Q8WUB8 498 aaKnown RBP3.89□□□□□ -1.79
CCDC171-207ENST00000478913 CCDC43Q96MW1 224 aaKnown RBP3.89□□□□□ -1.79
CCDC171-207ENST00000478913 CCL19Q99731 98 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 DCLRE1BQ9H816 532 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 FBXO8Q9NRD0 319 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 DNAJC11Q9NVH1 559 aa3.89□□□□□ -1.79
CCDC171-207ENST00000478913 PIKFYVEQ9Y2I7 2098 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SH3PXD2BA1X283 911 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 TRIM49BA6NDI0 452 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 C21orf140B9A014 251 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 TPM3P06753 285 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SFTPBP07988 381 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 HCKP08631 526 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 CYP2F1P24903 491 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 CD1CP29017 333 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 ALDH3B1P43353 468 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 MTIF2P46199 727 aaKnown RBP3.88□□□□□ -1.79
CCDC171-207ENST00000478913 CASP9P55211 416 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 UCP2P55851 309 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 P2RY14Q15391 338 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 ZNF239Q16600 458 aaKnown RBP3.88□□□□□ -1.79
CCDC171-207ENST00000478913 C2orf76Q3KRA6 126 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 CEP55Q53EZ4 464 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 MPPE1Q53F39 396 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 ZNF506Q5JVG8 444 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 WDR59Q6PJI9 974 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SASS6Q6UVJ0 657 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 REG3GQ6UW15 175 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 B3GLCTQ6Y288 498 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 ADAMTSL5Q6ZMM2 481 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 PAQR7Q86WK9 346 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 DOLPP1Q86YN1 238 aa3.88□□□□□ -1.79
CCDC171-207ENST00000478913 SERPINA12Q8IW75 414 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms