RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 WFDC6Q9BQY6 131 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 SPAG4Q9NPE6 437 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 PAQR5Q9NXK6 330 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 TESQ9UGI8 421 aaKnown RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF175Q9Y473 711 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 A0A1W2PNV4 684 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ZC3H12DA2A288 527 aaKnown RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ELOA3DA6NLF2 546 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CPSF4LA6NMK7 179 aaKnown RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 C19orf84I3L1E1 186 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SULT2B1O00204 365 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SMNDC1O75940 238 aaKnown RBP eCLIP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 FESP07332 822 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 HOXB1P14653 301 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 TCN1P20061 433 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 KLK2P20151 261 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 TNFRSF1BP20333 461 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CD247P20963 164 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 OPRM1P35372 400 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CPOXP36551 454 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 KCNJ5P48544 419 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 GSK3BP49841 420 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CSNK2A1P68400 391 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 VEZF1Q14119 521 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SLC25A35Q3KQZ1 300 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ELOA3BQ3SY89 546 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 OR2A2Q6IF42 318 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 C8orf82Q6P1X6 216 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 VWA1Q6PCB0 445 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 FCRLAQ7L513 359 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 LUZP2Q86TE4 346 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 FAM156AQ8NDB6 213 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ELOA3Q8NG57 546 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ABHD3Q8WU67 409 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 RASSF5Q8WWW0 418 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 PROX1Q92786 737 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ZFP3Q96NJ6 502 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF559Q9BR84 538 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SFXN3Q9BWM7 321 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 RNF122Q9H9V4 155 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SELENONQ9NZV5 590 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ABCD2Q9UBJ2 740 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 EGFL7Q9UHF1 273 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 AP3M1Q9Y2T2 418 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SH3GLB1Q9Y371 365 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 KLF2Q9Y5W3 355 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CACNA1DQ01668 2161 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 A0A1B0GWA3 101 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SYT5O00445 386 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CXCR6O00574 342 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 TNFSF13O75888 250 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF682O95780 498 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 LGI1O95970 557 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 IFNA14P01570 189 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 NCK1P16333 377 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ENPP1P22413 925 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 UQCRC1P31930 480 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 DLX5P56178 289 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CTBP2P56545 445 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 OR2B6P58173 313 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 KRT72Q14CN4 511 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 OR1Q1Q15612 314 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 NPTX1Q15818 432 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 NRF1Q16656 503 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CYBRD1Q53TN4 286 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ALG10BQ5I7T1 473 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 FAM91A1Q658Y4 838 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 DEF8Q6ZN54 512 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 CCDC80Q76M96 950 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ATG4DQ86TL0 474 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 RBM45Q8IUH3 476 aaKnown RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 P3H2Q8IVL5 708 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 DEFB107AQ8IZN7 70 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 OR4D11Q8NGI4 311 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 OR6T1Q8NGN1 323 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 RNF128Q8TEB7 428 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SLC35B4Q969S0 331 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 FAM162AQ96A26 154 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 MCHR1Q99705 422 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ARHGDIGQ99819 225 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 TRIM2Q9C040 744 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ADAM19Q9H013 955 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ADPRHL2Q9NX46 363 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF629Q9UEG4 869 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-215ENST00000478531 SLC9A8Q9Y2E8 581 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 EMC9Q9Y3B6 208 aa6.17□□□□□ -1.42
BRCA1-215ENST00000478531 hCG_2014768A0A024R1R8 64 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 B2RBV5 119 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 SMAD9O15198 467 aaKnown RBP6.16□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF208O43345 1280 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 TPST2O60704 377 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 PMS2P2O95744 297 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 SERPINA1P01009 418 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 C8BP07358 591 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 KDELR2P33947 212 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 IDUAP35475 653 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 OR1E2P47887 323 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 ASCL1P50553 236 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 MNAT1P51948 309 aa6.16□□□□□ -1.42
BRCA1-215ENST00000478531 RAC3P60763 192 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms