RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 EXD2Q9NVH0 621 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 PCYOX1Q9UHG3 505 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 MRPS33Q9Y291 106 aaKnown RBP0.82□□□□□ -2.28
HPS3-205ENST00000478525 IGKV1D-8A0A087WSZ0 117 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 LRRC30A6NM36 301 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 WASHC1A8K0Z3 465 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 AGPAT2O15120 278 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 ADAM12O43184 909 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 CENPBP07199 599 aaPredicted RBP0.81□□□□□ -2.28
HPS3-205ENST00000478525 CXCR2P25025 360 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 TCF7P36402 384 aaPredicted RBP0.81□□□□□ -2.28
HPS3-205ENST00000478525 ARRB1P49407 418 aaPredicted RBP0.81□□□□□ -2.28
HPS3-205ENST00000478525 HNRNPFP52597 415 aaKnown RBP0.81□□□□□ -2.28
HPS3-205ENST00000478525 ATXN3P54252 364 aaPredicted RBP0.81□□□□□ -2.28
HPS3-205ENST00000478525 SYCNQ0VAF6 134 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 ZNF816Q0VGE8 651 aaPredicted RBP0.81□□□□□ -2.28
HPS3-205ENST00000478525 SMARCB1Q12824 385 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 BAMBIQ13145 260 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 KIAA0087Q14695 138 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 NSUN5P1Q3KNT7 163 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 GLRA4Q5JXX5 417 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 MARCH8Q5T0T0 291 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 FAM92BQ6ZTR7 304 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 VPS36Q86VN1 386 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 ZNF573Q86YE8 665 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 RDH10Q8IZV5 341 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 CCDC89Q8N998 374 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 GATSQ8NAP1 163 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 LEMD2Q8NC56 503 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 OR4F15Q8NGB8 312 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 PHOSPHO2Q8TCD6 241 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 P2RY13Q9BPV8 354 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 FTHL17Q9BXU8 183 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 SLC5A7Q9GZV3 580 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 DEFB127Q9H1M4 99 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 ALDH8A1Q9H2A2 487 aaPredicted RBP0.81□□□□□ -2.28
HPS3-205ENST00000478525 ZNF385DQ9H6B1 395 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 GORASP2Q9H8Y8 452 aa0.81□□□□□ -2.28
HPS3-205ENST00000478525 IGHV1OR21-1A0A087WYE8 117 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 A0A1B0GVX0 72 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 ZNF263O14978 683 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 FMO3P31513 532 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 TGFBR1P36897 503 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 BDKRB1P46663 353 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 NTHL1P78549 312 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 HMGCS1Q01581 520 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 RALBP1Q15311 655 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 ADPRMQ3LIE5 342 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 FAHD2BQ6P2I3 314 aaPredicted RBP0.8□□□□□ -2.28
HPS3-205ENST00000478525 FAM159AQ6UWV7 190 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 PAQR7Q86WK9 346 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 ZNF679Q8IYX0 411 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 MIR7-3HGQ8N6C7 128 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 GOT1L1Q8NHS2 421 aaPredicted RBP0.8□□□□□ -2.28
HPS3-205ENST00000478525 FAHD2AQ96GK7 314 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 RPP21Q9H633 154 aaKnown RBP0.8□□□□□ -2.28
HPS3-205ENST00000478525 OARD1Q9Y530 152 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 MN1Q10571 1320 aaPredicted RBP0.8□□□□□ -2.28
HPS3-205ENST00000478525 COL11A1P12107 1806 aaPredicted RBP0.8□□□□□ -2.28
HPS3-205ENST00000478525 ADGRL1O94910 1474 aa0.8□□□□□ -2.28
HPS3-205ENST00000478525 DOCK8Q8NF50 2099 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 IGHV5-51A0A0C4DH38 117 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 IGHV3-66A0A0C4DH42 116 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 VSTM2BA6NLU5 285 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 ANKRD30BLA7E2S9 258 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 ZNF850A8MQ14 1090 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 J3QRE1 110 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 MBTPS2O43462 519 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 CCNKO75909 580 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 ANXA4P09525 319 aaPredicted RBP0.79□□□□□ -2.28
HPS3-205ENST00000478525 CLUP10909 449 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 KIR2DS4P43632 304 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 NUMBP49757 651 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 KIAA1024LP59773 190 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 KRTAP12-1P59990 96 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 IL15RAQ13261 267 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 CHI3L2Q15782 390 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 WDR86Q86TI4 376 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 RIMKLAQ8IXN7 391 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 ST7LQ8TDW4 575 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 TM4SF19Q96DZ7 209 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 NAT9Q9BTE0 207 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 LHX5Q9H2C1 402 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 RPAP3Q9H6T3 665 aaPredicted RBP0.79□□□□□ -2.28
HPS3-205ENST00000478525 SIAEQ9HAT2 523 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 MRPL39Q9NYK5 338 aaKnown RBP0.79□□□□□ -2.28
HPS3-205ENST00000478525 CLCF1Q9UBD9 225 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 P2RX2Q9UBL9 471 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 TRAF3IP3Q9Y228 551 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 SLC25A15Q9Y619 301 aa0.79□□□□□ -2.28
HPS3-205ENST00000478525 PHF3Q92576 2039 aaKnown RBP0.79□□□□□ -2.28
HPS3-205ENST00000478525 A0A0U1RQG5 324 aaPredicted RBP0.78□□□□□ -2.28
HPS3-205ENST00000478525 A0A1W2PNN7 141 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 RNF222A6NCQ9 220 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 PRDX2P32119 198 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 PITPNAQ00169 270 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 RIPPLY1Q0D2K3 151 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 RAB40BQ12829 278 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 GPRC6AQ5T6X5 926 aa0.78□□□□□ -2.28
HPS3-205ENST00000478525 CCDC137Q6PK04 289 aaKnown RBP0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms