RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 SQLEQ14534 574 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 LARS2Q15031 903 aaKnown RBP20.76■□□□□ 0.91
C9orf3-215ENST00000478473 ACKR1Q16570 336 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 PAGE3Q5JUK9 113 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 PIGXQ8TBF5 258 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 IGFBPL1Q8WX77 278 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 DDIT4LQ96D03 193 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 ZC3HAV1LQ96H79 300 aaKnown RBP20.76■□□□□ 0.91
C9orf3-215ENST00000478473 POTEKPQ9BYX7 375 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 ZNF385DQ9H6B1 395 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 EMC3Q9P0I2 261 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 ZNF232Q9UNY5 417 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 PRR14LQ5THK1 2151 aa20.76■□□□□ 0.91
C9orf3-215ENST00000478473 A0A1W2PP18 115 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 TMEM72A0PK05 275 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 GPR171O14626 319 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 EIF1BO60739 113 aaKnown RBP20.75■□□□□ 0.91
C9orf3-215ENST00000478473 SASH3O75995 380 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 ETS2P15036 469 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 COX5AP20674 150 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 FPR1P21462 350 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 C20orf204Q6ZNR8 217 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 CLIP4Q8N3C7 705 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 BBS10Q8TAM1 723 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 HSD17B8Q92506 261 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 S100PBPQ96BU1 408 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 SIKE1Q9BRV8 207 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 RABEP2Q9H5N1 569 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 VAPAQ9P0L0 249 aa20.75■□□□□ 0.91
C9orf3-215ENST00000478473 ZNF469Q96JG9 3925 aaPredicted RBP20.75■□□□□ 0.91
C9orf3-215ENST00000478473 EDF1O60869 148 aaKnown RBP20.74■□□□□ 0.91
C9orf3-215ENST00000478473 PGM3O95394 542 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 ADAP00813 363 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 ROS1P08922 2347 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 IMPDH2P12268 514 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 GPX2P18283 190 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 EDNRAP25101 427 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 ADAM8P78325 824 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 SLC35A1P78382 337 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 RPS26P11Q5JNZ5 115 aaPredicted RBP20.74■□□□□ 0.91
C9orf3-215ENST00000478473 WBP2NLQ6ICG8 309 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 SEZ6L2Q6UXD5 910 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 SSX8Q7RTT4 187 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 LRRC75A-AS1Q8N1F1 130 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 KISS1RQ969F8 398 aaPredicted RBP20.74■□□□□ 0.91
C9orf3-215ENST00000478473 PIGTQ969N2 578 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 ARMC7Q9H6L4 198 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 PRSS50Q9UI38 385 aa20.74■□□□□ 0.91
C9orf3-215ENST00000478473 NR5A2O00482 541 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 GKN3PP0CG01 181 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 ARAFP10398 606 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 NTF4P34130 210 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 TAB1Q15750 504 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 AGKQ53H12 422 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 PAQR6Q6TCH4 344 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 DLEU7Q6UYE1 221 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 KRTAP1-3Q8IUG1 177 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 C10orf111Q8N326 155 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 TSPEARQ8WU66 669 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 MAL2Q969L2 176 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 RSPO3Q9BXY4 272 aaPredicted RBP20.73■□□□□ 0.91
C9orf3-215ENST00000478473 TMEM38AQ9H6F2 299 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 DLL4Q9NR61 685 aa20.73■□□□□ 0.91
C9orf3-215ENST00000478473 ZC3H12DA2A288 527 aaKnown RBP20.72■□□□□ 0.91
C9orf3-215ENST00000478473 NPIPB7O75200 414 aa20.72■□□□□ 0.91
C9orf3-215ENST00000478473 PRG2P13727 222 aa20.72■□□□□ 0.91
C9orf3-215ENST00000478473 CD99P14209 185 aa20.72■□□□□ 0.91
C9orf3-215ENST00000478473 METTL21CQ5VZV1 264 aa20.72■□□□□ 0.91
C9orf3-215ENST00000478473 ADAM5Q6NVV9 412 aa20.72■□□□□ 0.91
C9orf3-215ENST00000478473 DPP10Q8N608 796 aa20.72■□□□□ 0.91
C9orf3-215ENST00000478473 PIF1Q9H611 641 aa20.72■□□□□ 0.91
C9orf3-215ENST00000478473 CORO2BQ9UQ03 480 aa20.72■□□□□ 0.91
C9orf3-215ENST00000478473 ACANP16112 2415 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 RAMP1O60894 148 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 TMCC2O75069 709 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 FZD7O75084 574 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 IL32P24001 234 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 PRKAR1BP31321 381 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 OR2B6P58173 313 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 COPZ1P61923 177 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 ZNF311Q5JNZ3 666 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 FBXW9Q5XUX1 488 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 ZNF704Q6ZNC4 412 aaPredicted RBP20.71■□□□□ 0.91
C9orf3-215ENST00000478473 P2RY8Q86VZ1 359 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 CCDC103Q8IW40 242 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 PLPPR2Q96GM1 343 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 IKZF5Q9H5V7 419 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 MALT1Q9UDY8 824 aa20.71■□□□□ 0.91
C9orf3-215ENST00000478473 NOSIPQ9Y314 301 aaKnown RBP20.71■□□□□ 0.91
C9orf3-215ENST00000478473 LIPT2A6NK58 231 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 TMEM229AB2RXF0 380 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 FOSL1P15407 271 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 CCNA2P20248 432 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 IGHV1-2P23083 117 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 CXCR1P25024 350 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 SLC17A1Q14916 467 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 TSC22D1Q15714 1073 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 GCNT6Q5T4J0 391 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 REEP3Q6NUK4 255 aa20.7■□□□□ 0.9
C9orf3-215ENST00000478473 C6orf89Q6UWU4 347 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms