RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CALRP27797 417 aaKnown RBP7.25□□□□□ -1.25
VMA21-203ENST00000477649 EVI2BP34910 448 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 POLR2HP52434 150 aaKnown RBP7.25□□□□□ -1.25
VMA21-203ENST00000477649 LIMK1P53667 647 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 GAS1P54826 345 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 PRSS12P56730 875 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 TAS2R43P59537 309 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 HSF2Q03933 536 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 FOXC1Q12948 553 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 SNTA1Q13424 505 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 SPCS2Q15005 226 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 TRAM1Q15629 374 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 CD226Q15762 336 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 ZNF74Q16587 644 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 DCAF12Q5T6F0 453 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 NIPAL3Q6P499 406 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 TMEM81Q6P7N7 255 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 TUBA3EQ6PEY2 450 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 ZNF517Q6ZMY9 492 aaPredicted RBP7.25□□□□□ -1.25
VMA21-203ENST00000477649 HIST3H2AQ7L7L0 130 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 ADCK1Q86TW2 530 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 CPOQ8IVL8 374 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 PRSS58Q8IYP2 241 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 KLHL36Q8N4N3 616 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 ACBD7Q8N6N7 88 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 ZNF321PQ8N8H1 164 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 SLC38A9Q8NBW4 561 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 GALNT6Q8NCL4 622 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 OR13C2Q8NGS9 318 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 B4GALNT2Q8NHY0 566 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 TBC1D15Q8TC07 691 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 M1APQ8TC57 530 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 DYNC2LI1Q8TCX1 351 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 RHBDD1Q8TEB9 315 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 UFD1Q92890 307 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 HIST1H2ACQ93077 130 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 SNX18Q96RF0 628 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 WDR77Q9BQA1 342 aaPredicted RBP7.25□□□□□ -1.25
VMA21-203ENST00000477649 DDA1Q9BW61 102 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 B3GNT4Q9C0J1 378 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 ZNF700Q9H0M5 742 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 DCSTAMPQ9H295 470 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 MCCC2Q9HCC0 563 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 ATP13A2Q9NQ11 1180 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 HINT3Q9NQE9 182 aaKnown RBP7.25□□□□□ -1.25
VMA21-203ENST00000477649 FSCN3Q9NQT6 498 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 NANSQ9NR45 359 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 NDUFB11Q9NX14 153 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 OCIAD1Q9NX40 245 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 CHRNA9Q9UGM1 479 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 OSGIN1Q9UJX0 560 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 STUB1Q9UNE7 303 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 SSR3Q9UNL2 185 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 MOKQ9UQ07 419 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 CARD8Q9Y2G2 431 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 CAB39Q9Y376 341 aaPredicted RBP7.25□□□□□ -1.25
VMA21-203ENST00000477649 PCDHGA1Q9Y5H4 931 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 NOX1Q9Y5S8 564 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 PCDH15Q96QU1 1955 aa7.25□□□□□ -1.25
VMA21-203ENST00000477649 TRAV36DV7A0A075B6V5 113 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 IGLV3-32A0A0A0MS00 114 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ARPC4-TTLL3A0A0A6YYG9 625 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 TRBV11-1A0A0K0K1C0 115 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ANKUB1A6NFN9 424 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 A8MVM7 634 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 CLDN25C9JDP6 229 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ETV2O00321 342 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 KPNA4O00629 521 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 TP53I11O14683 189 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 SLC30A4O14863 429 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 FOXD2O60548 495 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 ADAM11O75078 769 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 TRIM3O75382 744 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 TIAF1O95411 115 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 TXNDC12O95881 172 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 CD14P08571 375 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 RAB40ALP0C0E4 278 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 TSPAN19P0C672 248 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 HSMCR30P0CW71 290 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 GADD45AP24522 165 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ITPKBP27987 946 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 TACR3P29371 465 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 RPL4P36578 427 aaKnown RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 APOBEC1P41238 236 aaKnown RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 RNF144AP50876 292 aaPredicted RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 CCR4P51679 360 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 EFNA3P52797 238 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 BLVRAP53004 296 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 SLC25A1P53007 311 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 FXYD6P3P58550 94 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ZNF117Q03924 483 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 MRPL28Q13084 256 aaKnown RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 ITGADQ13349 1161 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 AQP6Q13520 282 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 GGTLC2Q14390 218 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 ZNF846Q147U1 533 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 TSTQ16762 297 aaKnown RBP7.24□□□□□ -1.25
VMA21-203ENST00000477649 FAAH2Q6GMR7 532 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 PLBD1Q6P4A8 553 aa7.24□□□□□ -1.25
VMA21-203ENST00000477649 APOOLQ6UXV4 268 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms