RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 ZNF836Q6ZNA1 936 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 ESPNLQ6ZVH7 1005 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 PLEKHM3Q6ZWE6 761 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 CLIP4Q8N3C7 705 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 NFKBIDQ8NI38 313 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 MRGPRX4Q96LA9 322 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 CTPS2Q9NRF8 586 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 ACTR3BQ9P1U1 418 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 KCNN3Q9UGI6 736 aa15.77■□□□□ 0.11
PTPN7-209ENST00000477554 ING1Q9UK53 422 aaPredicted RBP15.77■□□□□ 0.11
PTPN7-209ENST00000477554 DSPPQ9NZW4 1301 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 CREBBPQ92793 2442 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 A0A0G2JPF8 293 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 HNRNPCL2B2RXH8 293 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 HNRNPCL3B7ZW38 293 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 CXCR6O00574 342 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 HNRNPCL4P0DMR1 293 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 PRG2P13727 222 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 CCNA2P20248 432 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 ELK4P28324 431 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 EIF1P41567 113 aaKnown RBP15.76■□□□□ 0.11
PTPN7-209ENST00000477554 CARD18P57730 90 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 MERTKQ12866 999 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 C1orf146Q5VVC0 180 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 DHFR2Q86XF0 187 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 BBS10Q8TAM1 723 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 PMM1Q92871 262 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 TRIM15Q9C019 465 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 OR11A1Q9GZK7 315 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 PCDHAC1Q9H158 963 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 GORASP2Q9H8Y8 452 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 BCL2L10Q9HD36 194 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 FREM1Q5H8C1 2179 aa15.76■□□□□ 0.11
PTPN7-209ENST00000477554 AKAP6Q13023 2319 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 A0A1W2PPR1 153 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 FRS3O43559 492 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 PGM3O95394 542 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 ADH6P28332 368 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 IDH2P48735 452 aaKnown RBP15.75■□□□□ 0.11
PTPN7-209ENST00000477554 MS4A2Q01362 244 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 FLOT2Q14254 428 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 CCDC80Q76M96 950 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 NUFIP2Q7Z417 695 aaKnown RBP15.75■□□□□ 0.11
PTPN7-209ENST00000477554 PATL1Q86TB9 770 aaKnown RBP15.75■□□□□ 0.11
PTPN7-209ENST00000477554 TMEM200AQ86VY9 491 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 ADGRG3Q86Y34 549 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 KRT73Q86Y46 540 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 LURAP1LQ8IV03 231 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 WDR60Q8WVS4 1066 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 ZNF775Q96BV0 537 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-209ENST00000477554 ARL5BQ96KC2 179 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 LRGUKQ96M69 825 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 ZNF607Q96SK3 696 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 PRRG4Q9BZD6 226 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 C12orf49Q9H741 205 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.75■□□□□ 0.11
PTPN7-209ENST00000477554 ACER3Q9NUN7 267 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 SLC35A3Q9Y2D2 325 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 PRR14LQ5THK1 2151 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 MYO9AB2RTY4 2548 aa15.75■□□□□ 0.11
PTPN7-209ENST00000477554 SPG11Q96JI7 2443 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 ZNF814B7Z6K7 855 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 ACOT8O14734 319 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 ARPC2O15144 300 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 SIAH2O43255 324 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 CTAG2O75638 210 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 IFNA14P01570 189 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 EEF1A1P68104 462 aaKnown RBP15.74■□□□□ 0.11
PTPN7-209ENST00000477554 HOXC5Q00444 222 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 SELENBP1Q13228 472 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 MTX3Q5HYI7 312 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 ANKRD34AQ69YU3 496 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 OR2A2Q6IF42 318 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 FAM214BQ7L5A3 538 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.74■□□□□ 0.11
PTPN7-209ENST00000477554 ZNF550Q7Z398 422 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 OR52E4Q8NGH9 312 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 RNF128Q8TEB7 428 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 POP5Q969H6 163 aaKnown RBP15.74■□□□□ 0.11
PTPN7-209ENST00000477554 FAM162AQ96A26 154 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 NSMCE2Q96MF7 247 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 OR5B2Q96R09 309 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 SPATA5L1Q9BVQ7 753 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 PIGMQ9H3S5 423 aa15.74■□□□□ 0.11
PTPN7-209ENST00000477554 MTHFD2LQ9H903 347 aaPredicted RBP15.74■□□□□ 0.11
PTPN7-209ENST00000477554 ZC3H12DA2A288 527 aaKnown RBP15.73■□□□□ 0.11
PTPN7-209ENST00000477554 FAM221AA4D161 298 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 TUBAL3A6NHL2 446 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 MSTNO14793 375 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 SMAD9O15198 467 aaKnown RBP15.73■□□□□ 0.11
PTPN7-209ENST00000477554 RAMP1O60894 148 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 SS18L1O75177 396 aaPredicted RBP15.73■□□□□ 0.11
PTPN7-209ENST00000477554 SERPINB7O75635 380 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 ETS2P15036 469 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 NCK1P16333 377 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 IL7RP16871 459 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 PGCP20142 388 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 AGTR1P30556 359 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 KDELR2P33947 212 aa15.73■□□□□ 0.11
PTPN7-209ENST00000477554 ACAA2P42765 397 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms