RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 A0A087WUU8 490 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 A0A1B0GTH9 108 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 ZC3H12DA2A288 527 aaKnown RBP14.58□□□□□ -0.08
VHL-203ENST00000477538 GJE1A6NN92 205 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 KPNA4O00629 521 aaPredicted RBP14.58□□□□□ -0.08
VHL-203ENST00000477538 E2F6O75461 281 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 BAG2O95816 211 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 FKBP2P26885 142 aaKnown RBP14.58□□□□□ -0.08
VHL-203ENST00000477538 SHC1P29353 583 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 DNAJA1P31689 397 aaKnown RBP14.58□□□□□ -0.08
VHL-203ENST00000477538 LHX2P50458 406 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 HMGA2P52926 109 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 IST1P53990 364 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 UGT2B15P54855 530 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 HSF1Q00613 529 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 EGR4Q05215 589 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 CRYZQ08257 329 aaKnown RBP14.58□□□□□ -0.08
VHL-203ENST00000477538 GK3PQ14409 553 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 TMEM176BQ3YBM2 270 aaPredicted RBP14.58□□□□□ -0.08
VHL-203ENST00000477538 VASNQ6EMK4 673 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 ARHGAP11AQ6P4F7 1023 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 C5orf46Q6UWT4 87 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 RRM2BQ7LG56 351 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 P3H2Q8IVL5 708 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 PQLC1Q8N2U9 271 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 OR4C15Q8NGM1 316 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 RELTQ969Z4 430 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 CENPNQ96H22 339 aaPredicted RBP14.58□□□□□ -0.08
VHL-203ENST00000477538 BARD1Q99728 777 aaKnown RBP14.58□□□□□ -0.08
VHL-203ENST00000477538 FUZQ9BT04 418 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 SLC19A3Q9BZV2 496 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 SEMA6AQ9H2E6 1030 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 NTN4Q9HB63 628 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 MED31Q9Y3C7 131 aa14.58□□□□□ -0.08
VHL-203ENST00000477538 SH3PXD2BA1X283 911 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 SEC14L5O43304 696 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 PIP5K1CO60331 668 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 NPIPB7O75200 414 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 FPR1P21462 350 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 CLK1P49759 484 aaKnown RBP14.57□□□□□ -0.08
VHL-203ENST00000477538 CLDN18P56856 261 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 SEC23BQ15437 767 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 C1orf140Q5VVS0 124 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 TBPL2Q6SJ96 375 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 TMEM179BQ7Z7N9 219 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 GGNQ86UU5 652 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 UBQLNLQ8IYU4 475 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 RNF113BQ8IZP6 322 aaKnown RBP14.57□□□□□ -0.08
VHL-203ENST00000477538 OR4K5Q8NGD3 323 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 PFN4Q8NHR9 129 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 SARAFQ96BY9 339 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 KTI12Q96EK9 354 aaPredicted RBP14.57□□□□□ -0.08
VHL-203ENST00000477538 DNAJA3Q96EY1 480 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 ARL5BQ96KC2 179 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 KLHL15Q96M94 604 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 OR5B2Q96R09 309 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 POTEKPQ9BYX7 375 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 DCLRE1BQ9H816 532 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 MEPEQ9NQ76 525 aaPredicted RBP14.57□□□□□ -0.08
VHL-203ENST00000477538 TNFRSF10DQ9UBN6 386 aa14.57□□□□□ -0.08
VHL-203ENST00000477538 RP1L1Q8IWN7 2480 aaPredicted RBP14.57□□□□□ -0.08
VHL-203ENST00000477538 TRAV36DV7A0A075B6V5 113 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 A0A0J9YW62 118 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 A0A1W2PNR3 127 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 EIF1AYO14602 144 aaKnown RBP14.56□□□□□ -0.08
VHL-203ENST00000477538 CCNB2O95067 398 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 AHSA1O95433 338 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 ANPEPP15144 967 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 ZNF708P17019 499 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 RPS5P46782 204 aaKnown RBP14.56□□□□□ -0.08
VHL-203ENST00000477538 MLLT10P55197 1068 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 CLDN20P56880 219 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 LSM11P83369 360 aaKnown RBP eCLIP14.56□□□□□ -0.08
VHL-203ENST00000477538 LAPTM4AQ15012 233 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 BCL2A1Q16548 175 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 C1QL3Q5VWW1 255 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 ESPNLQ6ZVH7 1005 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 MBOAT2Q6ZWT7 520 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 NRMQ8IXM6 262 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 MEIOBQ8N635 442 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 CPT1CQ8TCG5 803 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 BBC3Q96PG8 261 aaPredicted RBP14.56□□□□□ -0.08
VHL-203ENST00000477538 TIMP4Q99727 224 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 KLHL4Q9C0H6 718 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 C6orf203Q9P0P8 240 aaPredicted RBP14.56□□□□□ -0.08
VHL-203ENST00000477538 HDGFL3Q9Y3E1 203 aa14.56□□□□□ -0.08
VHL-203ENST00000477538 OR14I1A6ND48 311 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 ENO4A6NNW6 628 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 NPIPA2E9PIF3 369 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 NPIPA3F8WFD2 350 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 H0YC42 278 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 TNFSF11O14788 317 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 MGRN1O60291 552 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 OR10H3O60404 316 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 IFI30P13284 250 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 ZNF23P17027 643 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 IDUAP35475 653 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 ARHGDIAP52565 204 aa14.55□□□□□ -0.08
VHL-203ENST00000477538 SUCLG1P53597 346 aaKnown RBP14.55□□□□□ -0.08
VHL-203ENST00000477538 TPD52P55327 224 aaPredicted RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms