RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 VLDLRP98155 873 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MXD1Q05195 221 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SRSF4Q08170 494 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MTAPQ13126 283 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF177Q13360 481 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ALKBH1Q13686 389 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 DDX39BQ13838 428 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RAB33AQ14088 237 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RBBP7Q16576 425 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PTCHD3Q3KNS1 767 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 FAM174BQ3ZCQ3 159 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SLC36A2Q495M3 483 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MINDY4Q4G0A6 757 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 AARDQ4LEZ3 155 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MANEAQ5SRI9 462 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 HENMT1Q5T8I9 393 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ARMC12Q5T9G4 340 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ANXA8L1Q5VT79 327 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 LIPKQ5VXJ0 399 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 LIPJQ5W064 366 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 OLFML2AQ68BL7 652 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TPGS2Q68CL5 300 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 IL31Q6EBC2 164 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ADNP2Q6IQ32 1131 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 CXorf57Q6NSI4 855 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 CDC73Q6P1J9 531 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 IL27RAQ6UWB1 636 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 DRAM2Q6UX65 266 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ZNF813Q6ZN06 617 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 UBE2R2Q712K3 238 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 NDUFAF7Q7L592 441 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TMPRSS11BQ86T26 416 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 FJX1Q86VR8 437 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 IQCHQ86VS3 1027 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 VRK3Q8IV63 474 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MSRB3Q8IXL7 192 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 LAS2Q8IYD9 372 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 OR4N4Q8N0Y3 316 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PYROXD2Q8N2H3 581 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PGBD5Q8N414 524 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SLC5A8Q8N695 610 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SYT14Q8NB59 555 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 AVL9Q8NBF6 648 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TMEM185AQ8NFB2 350 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 OR9Q2Q8NGE9 314 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 OR13D1Q8NGV5 346 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 STOML3Q8TAV4 291 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 CSGALNACT1Q8TDX6 532 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 CCDC107Q8WV48 283 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 GEMIN6Q8WXD5 167 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MAFIPQ8WZ33 124 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 NELL1Q92832 810 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RPL10LQ96L21 214 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 LRR1Q96L50 414 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 C12orf66Q96MD2 445 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 WFIKKN1Q96NZ8 548 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 DDOQ99489 341 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PRRX2Q99811 253 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 EGFL8Q99944 293 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 VRK1Q99986 396 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MGME1Q9BQP7 344 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 AARSD1Q9BTE6 412 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 FSD1LQ9BXM9 530 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 FAM126AQ9BYI3 521 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TM6SF2Q9BZW4 377 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ELOVL4Q9GZR5 314 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MFFQ9GZY8 342 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 C20orf85Q9H1P6 137 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SYT4Q9H2B2 425 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ACTL8Q9H568 366 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 RPF1Q9H9Y2 349 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MAN2C1Q9NTJ4 1040 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 ZSCAN32Q9NX65 697 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TEX10Q9NXF1 929 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 GAR1Q9NY12 217 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PLA2G3Q9NZ20 509 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PIPOXQ9P0Z9 390 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 UXTQ9UBK9 157 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TESQ9UGI8 421 aaKnown RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 EVLQ9UI08 416 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TSPAN16Q9UKR8 245 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TBX21Q9UL17 535 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 TNFSF13BQ9Y275 285 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PRKAB1Q9Y478 270 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 PLEKHM1Q9Y4G2 1056 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SPIN1Q9Y657 262 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-212ENST00000477520 DSPPQ9NZW4 1301 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 SIP14410 1827 aa4.35□□□□□ -1.71
PTCD3-212ENST00000477520 MYO9BQ13459 2157 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 A0A087X0M5 115 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 CCDC163A0A0D9SF12 145 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 A0A1B0GX30 115 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 TCRBV16S1A1N1A0A5B0 115 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 RNF222A6NCQ9 220 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 UNC119BA6NIH7 251 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 GABARAPH6UMI1 98 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 FAAHO00519 579 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 MFNGO00587 321 aa4.34□□□□□ -1.71
PTCD3-212ENST00000477520 TOX3O15405 576 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-212ENST00000477520 PRODHO43272 600 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms