RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ATAD3BQ5T9A4 648 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 LCE2DQ5TA82 110 aaPredicted RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 TSPO2Q5TGU0 170 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 BHLHB9Q6PI77 547 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 TIFABQ6ZNK6 161 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 TUBA1AQ71U36 451 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF572Q7Z3I7 529 aaPredicted RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 C17orf78Q8N4C9 275 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 LINC01356Q8N9X3 169 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 WDR31Q8NA23 367 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 FNDC5Q8NAU1 212 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 ACMSDQ8TDX5 336 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 TWIST2Q8WVJ9 160 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 OR5P2Q8WZ92 322 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 MOAP1Q96BY2 351 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 DDIT4LQ96D03 193 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 AURKBQ96GD4 344 aaPredicted RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 MUS81Q96NY9 551 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 SLC38A2Q96QD8 506 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 SDF2Q99470 211 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 PRPF18Q99633 342 aaKnown RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 NAA11Q9BSU3 229 aaPredicted RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 BHLHE41Q9C0J9 482 aaPredicted RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 METTL17Q9H7H0 456 aaPredicted RBP5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 LPAR2Q9HBW0 351 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 DYNLRB1Q9NP97 96 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 CA10Q9NS85 328 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 ACER3Q9NUN7 267 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 EXD2Q9NVH0 621 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 GPATCH2Q9NW75 528 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 PARPBPQ9NWS1 579 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 DCTN4Q9UJW0 460 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 HDGFL3Q9Y3E1 203 aa5.83□□□□□ -1.48
RTFDC1-206ENST00000477485 SVEP1Q4LDE5 3571 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 A0A096LPE4 126 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 TMED7-TICAM2A0A0A6YYA0 188 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 IGHV1-18A0A0C4DH31 117 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 A0A1W2PPZ6 126 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 DUXAA6NLW8 204 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ESPNB1AK53 854 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 B9A039 149 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ZNF587BE7ETH6 402 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 NPIPB8E9PQR5 432 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 NPIPB9F8W1W9 429 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 hCG_2039718K7EN88 272 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 COPEO14579 308 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 RIPK2O43353 540 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 SCN2BO60939 215 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 UGT2B17O75795 530 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 STAMBPO95630 424 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 LGI1O95970 557 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 AK1P00568 194 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ABHD2P08910 425 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 MPGP29372 298 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ECHS1P30084 290 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 NTF4P34130 210 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 CAPZA2P47755 286 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 CCT5P48643 541 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 IDH2P48735 452 aaKnown RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 DNAJB13P59910 316 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 SLC35A1P78382 337 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 PDK3Q15120 406 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 TRIP10Q15642 601 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 SWI5Q1ZZU3 235 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 MST1LQ2TV78 715 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 FAM174BQ3ZCQ3 159 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ATP6AP1LQ52LC2 224 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 GPAT3Q53EU6 434 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 EXOSC6Q5RKV6 272 aaKnown RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 OTUD3Q5T2D3 398 aaPredicted RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 KANK2Q63ZY3 851 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 TNFAIP8L2Q6P589 184 aaPredicted RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 AAED1Q7RTV5 226 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 GRINAQ7Z429 371 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 C6orf120Q7Z4R8 191 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 SPATA21Q7Z572 469 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ABHD12BQ7Z5M8 362 aaPredicted RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 C10orf107Q8IVU9 208 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ZCCHC24Q8N2G6 241 aaKnown RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 SVOPLQ8N434 492 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ARFGAP2Q8N6H7 521 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 KRTCAP2Q8N6L1 136 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 NOA1Q8NC60 698 aaKnown RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 C1orf162Q8NEQ5 155 aaPredicted RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 OR4A15Q8NGL6 344 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 SFXN5Q8TD22 340 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 XAGE5Q8WWM1 108 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 RAB8BQ92930 207 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 GCDHQ92947 438 aaPredicted RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 FCRL1Q96LA6 429 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 PPP3R2Q96LZ3 170 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 C16orf45Q96MC5 204 aaPredicted RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 ALKBH3Q96Q83 286 aaPredicted RBP5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 DUSP26Q9BV47 211 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 CCDC106Q9BWC9 280 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 NMUR2Q9GZQ4 415 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 OR51I1Q9H343 314 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 TPK1Q9H3S4 243 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 TUBB1Q9H4B7 451 aa5.82□□□□□ -1.48
RTFDC1-206ENST00000477485 TMEM45AQ9NWC5 275 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms