RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 NFKBIDQ8NI38 313 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 BBS10Q8TAM1 723 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 MBD6Q96DN6 1003 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 ZC3HAV1LQ96H79 300 aaKnown RBP13.79□□□□□ -0.2
COMMD6-209ENST00000477377 WFDC6Q9BQY6 131 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 SIKE1Q9BRV8 207 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 RAD21L1Q9H4I0 556 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 TMEM38AQ9H6F2 299 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 TMEM181Q9P2C4 612 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 PRDM4Q9UKN5 801 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 IFT52Q9Y366 437 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 SPIN1Q9Y657 262 aaPredicted RBP13.79□□□□□ -0.2
COMMD6-209ENST00000477377 F8P00451 2351 aa13.79□□□□□ -0.2
COMMD6-209ENST00000477377 RAI1Q7Z5J4 1906 aaPredicted RBP13.78□□□□□ -0.2
COMMD6-209ENST00000477377 A0A0G2JND7 137 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 FBP2O00757 339 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 FRS3O43559 492 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 DNPH1O43598 174 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 NPIPB7O75200 414 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 ADAP00813 363 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 TFPIP10646 304 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 ETS2P15036 469 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 CD53P19397 219 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 P2RY4P51582 365 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 SLC16A1P53985 500 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 CDK6Q00534 326 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 BNIP2Q12982 314 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 LARS2Q15031 903 aaKnown RBP13.78□□□□□ -0.2
COMMD6-209ENST00000477377 GLIPR1L2Q4G1C9 344 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF311Q5JNZ3 666 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 GCNT6Q5T4J0 391 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 METTL21CQ5VZV1 264 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 C3orf49Q96BT1 292 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 S100PBPQ96BU1 408 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 TACO1Q9BSH4 297 aaKnown RBP13.78□□□□□ -0.2
COMMD6-209ENST00000477377 TMEM120AQ9BXJ8 343 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 POTEKPQ9BYX7 375 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 ACTR6Q9GZN1 396 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 RABEP2Q9H5N1 569 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 ZNF226Q9NYT6 803 aa13.78□□□□□ -0.2
COMMD6-209ENST00000477377 TMEM229AB2RXF0 380 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 TPST2O60704 377 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 PPP3CBP16298 524 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 FPR1P21462 350 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 PRKAR1BP31321 381 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 GZMMP51124 257 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 MAP2K6P52564 334 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 EGR4Q05215 589 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 ZSWIM7Q19AV6 140 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 WBP2NLQ6ICG8 309 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 REEP3Q6NUK4 255 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 ATG4DQ86TL0 474 aaPredicted RBP13.77□□□□□ -0.21
COMMD6-209ENST00000477377 STK32CQ86UX6 486 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 TSPEARQ8WU66 669 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 SLC35B4Q969S0 331 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 PIK3IP1Q96FE7 263 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 ANKRD27Q96NW4 1050 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 CCDC134Q9H6E4 229 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 FGFR1OP2Q9NVK5 253 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 LEF1Q9UJU2 399 aaPredicted RBP13.77□□□□□ -0.21
COMMD6-209ENST00000477377 ZNF232Q9UNY5 417 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 NDUFAF1Q9Y375 327 aa13.77□□□□□ -0.21
COMMD6-209ENST00000477377 TEP1Q99973 2627 aaKnown RBP13.77□□□□□ -0.21
COMMD6-209ENST00000477377 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.76□□□□□ -0.21
COMMD6-209ENST00000477377 LIPT2A6NK58 231 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 RAF1P04049 648 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 IGHV1-2P23083 117 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 PPIBP23284 216 aaKnown RBP13.76□□□□□ -0.21
COMMD6-209ENST00000477377 HTR2AP28223 471 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 PCBP3P57721 371 aaKnown RBP13.76□□□□□ -0.21
COMMD6-209ENST00000477377 OR2B6P58173 313 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 GUCY1A3Q02108 690 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 DHRS4L2Q6PKH6 230 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 Q6ZT83 130 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 GALNT5Q7Z7M9 940 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 DHDDSQ86SQ9 333 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 KRTAP1-3Q8IUG1 177 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 CADM2Q8N3J6 435 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 IGFBPL1Q8WX77 278 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 DDIT4LQ96D03 193 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 CGREF1Q99674 301 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 TMEM204Q9BSN7 226 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 PRR14Q9BWN1 585 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 HDHD5Q9BXW7 423 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 TRIM33Q9UPN9 1127 aa13.76□□□□□ -0.21
COMMD6-209ENST00000477377 TMEM247A6NEH6 219 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 FZD7O75084 574 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 MFN2O95140 757 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 PLAUP00749 431 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 COX5AP20674 150 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 DNASE1P24855 282 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 FOXG1P55316 489 aaPredicted RBP13.75□□□□□ -0.21
COMMD6-209ENST00000477377 MTPNP58546 118 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 SLC35A1P78382 337 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 DMTNQ08495 405 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 SF3A3Q12874 501 aaKnown RBP eCLIP13.75□□□□□ -0.21
COMMD6-209ENST00000477377 ITGADQ13349 1161 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 CEACAM7Q14002 265 aa13.75□□□□□ -0.21
COMMD6-209ENST00000477377 SCARB2Q14108 478 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms