RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ZNF724A8MTY0 619 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 OVOL3O00110 214 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 UBFD1O14562 309 aaKnown RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 CD5LO43866 347 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 PLIN3O60664 434 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 IGKV1D-16P01601 117 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 HMGN2P05204 90 aaKnown RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 FGF4P08620 206 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 LINGO3P0C6S8 592 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 UBL4AP11441 157 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 SDC1P18827 310 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 GGT1P19440 569 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 PRPS1L1P21108 318 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 PSMA4P25789 261 aaKnown RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 OR3A2P47893 321 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 CCR4P51679 360 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 CD83Q01151 205 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 CHRNB3Q05901 458 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 RASGEF1BQ0VAM2 473 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 FOXF1Q12946 379 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 PDE7AQ13946 482 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 LASP1Q14847 261 aaKnown RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 KIAA0040Q15053 153 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 TAB1Q15750 504 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 DCST2Q5T1A1 773 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 ATAD3BQ5T9A4 648 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 OR7E24Q6IFN5 339 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 CLEC2AQ6UVW9 174 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 APOOLQ6UXV4 268 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 PRIMA1Q86XR5 153 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 GABRG1Q8N1C3 465 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 FBXL14Q8N1E6 418 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 NOA1Q8NC60 698 aaKnown RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 ATP6V1C2Q8NEY4 427 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 VPS37AQ8NEZ2 397 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 OR5W2Q8NH69 310 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 UBLCP1Q8WVY7 318 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 IGFBPL1Q8WX77 278 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 ST8SIA1Q92185 356 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 FAM120BQ96EK7 910 aaKnown RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 EGLN2Q96KS0 407 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 FCRL1Q96LA6 429 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 RTN4RQ9BZR6 473 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 AMBRA1Q9C0C7 1298 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 BCO1Q9HAY6 547 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 TCF7L1Q9HCS4 588 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 YAE1D1Q9NRH1 226 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 CISD1Q9NZ45 108 aaKnown RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 PRSS50Q9UI38 385 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 LIPT1Q9Y234 373 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 FIS1Q9Y3D6 152 aa6.43□□□□□ -1.38
BRCA1-214ENST00000477152 MAGED1Q9Y5V3 778 aaPredicted RBP6.43□□□□□ -1.38
BRCA1-214ENST00000477152 ZFHX3Q15911 3703 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CIB4A0PJX0 185 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 FAM234BA2RU67 622 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 RNF212BA8MTL3 300 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 VSTM5A8MXK1 200 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 B4DXG7 233 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 SCAMP2O15127 329 aaKnown RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 DNPH1O43598 174 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 STX11O75558 287 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 GCM2O75603 506 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 OPN1LWP04000 364 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 LINC00032P0C843 101 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 DHRS4L1P0CG22 281 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 UQCRBP14927 111 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 PTAFRP25105 342 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 GCAP28676 217 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ECHS1P30084 290 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CLK1P49759 484 aaKnown RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ANXA11P50995 505 aaKnown RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 NUDT6P53370 316 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 TGFBR3Q03167 851 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ZNF117Q03924 483 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 PDK3Q15120 406 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 RAB35Q15286 201 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 STK11Q15831 433 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 MLANAQ16655 118 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 KLHL26Q53HC5 615 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 SLC25A53Q5H9E4 307 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 KANK2Q63ZY3 851 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CLEC6AQ6EIG7 209 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 UBE2J2Q8N2K1 259 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 RFWD2Q8NHY2 731 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 FBXO30Q8TB52 745 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 PIGXQ8TBF5 258 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 ABHD3Q8WU67 409 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CDS1Q92903 461 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 GIMAP5Q96F15 307 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 NMUR2Q9GZQ4 415 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 LAT2Q9GZY6 243 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 SLCO5A1Q9H2Y9 848 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 FKRPQ9H9S5 495 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 PARPBPQ9NWS1 579 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 FBXO9Q9UK97 447 aaPredicted RBP6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CDC42EP3Q9UKI2 254 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 PRDM4Q9UKN5 801 aa6.42□□□□□ -1.38
BRCA1-214ENST00000477152 CARD8Q9Y2G2 431 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms