RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 NFU1Q9UMS0 254 aa13.15□□□□□ -0.3
SMG5-204ENST00000476954 SNX24Q9Y343 169 aa13.15□□□□□ -0.3
SMG5-204ENST00000476954 POLR3HQ9Y535 204 aaPredicted RBP13.15□□□□□ -0.3
SMG5-204ENST00000476954 IGHV2OR16-5A0A0B4J2B6 119 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 M0QZ24 198 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 ZNF264O43296 627 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 ULK1O75385 1050 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 CYP7B1O75881 506 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 IFI6P09912 130 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 EFNA1P20827 205 aaPredicted RBP13.14□□□□□ -0.31
SMG5-204ENST00000476954 TMEM33P57088 247 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 OR2B6P58173 313 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 DR1Q01658 176 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 SNTB2Q13425 540 aaKnown RBP13.14□□□□□ -0.31
SMG5-204ENST00000476954 SLC9A3R2Q15599 337 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 ZNF385BQ569K4 471 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 KRT80Q6KB66 452 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 CYS1Q717R9 158 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 ZNF771Q7L3S4 317 aaPredicted RBP13.14□□□□□ -0.31
SMG5-204ENST00000476954 GAS2L3Q86XJ1 694 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 CHMP6Q96FZ7 201 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 AURKBQ96GD4 344 aaPredicted RBP13.14□□□□□ -0.31
SMG5-204ENST00000476954 BOD1Q96IK1 185 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 EGLN2Q96KS0 407 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
SMG5-204ENST00000476954 NELFAQ9H3P2 528 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 ZMAT3Q9HA38 289 aaKnown RBP13.14□□□□□ -0.31
SMG5-204ENST00000476954 SERINC1Q9NRX5 453 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 PARPBPQ9NWS1 579 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 SLC9A8Q9Y2E8 581 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 SOX21Q9Y651 276 aaPredicted RBP13.14□□□□□ -0.31
SMG5-204ENST00000476954 KCNE3Q9Y6H6 103 aa13.14□□□□□ -0.31
SMG5-204ENST00000476954 VSTM5A8MXK1 200 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 NPIPB9F8W1W9 429 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 H3BNH8 94 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 M0R233 179 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 PIN1P1O15428 100 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 PDPK1O15530 556 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 SMIM24O75264 130 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 PMS2P2O95744 297 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 UBL4AP11441 157 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 ANPEPP15144 967 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 ATP6V1C1P21283 382 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 TYK2P29597 1187 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 HSD17B3P37058 310 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 UBE2NP61088 152 aaKnown RBP13.13□□□□□ -0.31
SMG5-204ENST00000476954 CBFBQ13951 182 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 C17orf107Q6ZR85 190 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 SPATC1Q76KD6 591 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 LINGO2Q7L985 606 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 ZIC4Q8N9L1 334 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 METTL6Q8TCB7 284 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 UBE2FQ969M7 185 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 SLC25A28Q96A46 364 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 ARL8AQ96BM9 186 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 KCNA7Q96RP8 456 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 CITED1Q99966 193 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 SYT3Q9BQG1 590 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 CTPS2Q9NRF8 586 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 TMEM45AQ9NWC5 275 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 SIRT5Q9NXA8 310 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 MYEF2Q9P2K5 600 aaKnown RBP13.13□□□□□ -0.31
SMG5-204ENST00000476954 MID2Q9UJV3 735 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 JRKLQ9Y4A0 524 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 DTNAQ9Y4J8 743 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 TIMM22Q9Y584 194 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 MMP24Q9Y5R2 645 aa13.13□□□□□ -0.31
SMG5-204ENST00000476954 ARPC4-TTLL3A0A0A6YYG9 625 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 ZNF503-AS2A6NEH8 195 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 PIP5K1BO14986 540 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 SYNGR3O43761 229 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 EIF4E2O60573 245 aaKnown RBP13.12□□□□□ -0.31
SMG5-204ENST00000476954 CDC14BO60729 498 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 TSPAN15O95858 294 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 KNG1P01042 644 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 CCNA2P20248 432 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 HMOX2P30519 316 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 GSTM5P46439 218 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 ATP12AP54707 1039 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 MRPS25P82663 173 aaKnown RBP13.12□□□□□ -0.31
SMG5-204ENST00000476954 H3F3AP84243 136 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 CLCQ05315 142 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 SKP2Q13309 424 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 DAG1Q14118 895 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 KLF17Q5JT82 389 aaPredicted RBP13.12□□□□□ -0.31
SMG5-204ENST00000476954 SPDYAQ5MJ70 313 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 ASPHD2Q6ICH7 369 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 BRICD5Q6PL45 260 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 LRP11Q86VZ4 500 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 ST8SIA1Q92185 356 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 ZNF385AQ96PM9 386 aaKnown RBP13.12□□□□□ -0.31
SMG5-204ENST00000476954 ACER3Q9NUN7 267 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 CMAHPQ9Y471 501 aa13.12□□□□□ -0.31
SMG5-204ENST00000476954 NUP214P35658 2090 aaPredicted RBP13.11□□□□□ -0.31
SMG5-204ENST00000476954 CENPVL1A0A0U1RR11 272 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 A8MT66 165 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 DNAJA2O60884 412 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 HSPA4LO95757 839 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 IGKV3-15P01624 115 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 SBK3P0C264 359 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms