RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PCDHB14Q9Y5E9 798 aa9.86□□□□□ -0.83
BRCA1-213ENST00000476777 SPIN1Q9Y657 262 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-213ENST00000476777 G3V2L1 256 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 TRIM77I1YAP6 450 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 SLC28A1O00337 649 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 ANKRD28O15084 1053 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 FCMRO60667 390 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 BCAS1O75363 584 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 CSTAP01040 98 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 CRYAAP02489 173 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 KRT16P08779 473 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 IGFBP1P08833 259 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 UROSP10746 265 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 LAMP1P11279 417 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 IFNGR1P15260 489 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 CDH2P19022 906 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 FKBP2P26885 142 aaKnown RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 GCAP28676 217 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 CALCRP30988 508 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 SLC1A3P43003 542 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 CLK1P49759 484 aaKnown RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 KHKP50053 298 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 OR2B6P58173 313 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 RPL38P63173 70 aaKnown RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 NAAAQ02083 359 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 SCGB2A2Q13296 93 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 SLC17A1Q14916 467 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 TBRG1Q3YBR2 411 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 CLEC6AQ6EIG7 209 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 ANKRD16Q6P6B7 361 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 R3HCC1LQ7Z5L2 792 aaKnown RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 LSRQ86X29 649 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 ADGRG3Q86Y34 549 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 FAM71CQ8NEG0 241 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 NUP37Q8NFH4 326 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 OR7A2PQ8NGA2 310 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 OR5D16Q8NGK9 328 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 UBASH3BQ8TF42 649 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 WDR60Q8WVS4 1066 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 TMEM45BQ96B21 275 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 DOK1Q99704 481 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 RBM4Q9BWF3 364 aaKnown RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 HIF1ANQ9NWT6 349 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 ATP6V1HQ9UI12 483 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 FBXO9Q9UK97 447 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-213ENST00000476777 PCDHB10Q9UN67 800 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 CMYA5Q8N3K9 4069 aa9.85□□□□□ -0.83
BRCA1-213ENST00000476777 TMEM129A0AVI4 362 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 LYNX1G3V0Z9 82 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 hCG_2039718K7EN88 272 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 SCAMP2O15127 329 aaKnown RBP9.84□□□□□ -0.83
BRCA1-213ENST00000476777 TMPRSS2O15393 492 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 UGT2B17O75795 530 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 ERCC1P07992 297 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-213ENST00000476777 CECR9P0C854 216 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 LYNX1P0DP58 116 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 BCKDHAP12694 445 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 CREB1P16220 341 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 PGM1P36871 562 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 ARFIP2P53365 341 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 NAA20P61599 178 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 RPS26P62854 115 aaKnown RBP9.84□□□□□ -0.83
BRCA1-213ENST00000476777 HGFACQ04756 655 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 GPR68Q15743 365 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 SPDYE7PQ495Y7 208 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 AWAT1Q58HT5 328 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 ZYG11AQ6WRX3 759 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 EIF3MQ7L2H7 374 aaKnown RBP9.84□□□□□ -0.83
BRCA1-213ENST00000476777 OLIG3Q7RTU3 272 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 GRINAQ7Z429 371 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 SVOPLQ8N434 492 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 ZIC4Q8N9L1 334 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 OR4F15Q8NGB8 312 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 SFXN5Q8TD22 340 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 OR5P2Q8WZ92 322 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 TMEM186Q96B77 213 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 CCDC126Q96EE4 140 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 TUBB1Q9H4B7 451 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 ZNF442Q9H7R0 627 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 ZNF696Q9H7X3 374 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 SEC61A2Q9H9S3 476 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 TMEM181Q9P2C4 612 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 CRNNQ9UBG3 495 aaPredicted RBP9.84□□□□□ -0.83
BRCA1-213ENST00000476777 EMCNQ9ULC0 261 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 TMED5Q9Y3A6 229 aa9.84□□□□□ -0.83
BRCA1-213ENST00000476777 NBEAL2Q6ZNJ1 2754 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 A0A087WUV0 522 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-213ENST00000476777 EXOC1LA0A1B0GW35 172 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 NR5A2O00482 541 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 LSM1O15116 133 aaKnown RBP9.83□□□□□ -0.84
BRCA1-213ENST00000476777 EIF1BO60739 113 aaKnown RBP9.83□□□□□ -0.84
BRCA1-213ENST00000476777 STX11O75558 287 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 C6orf47O95873 294 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 IGLV1-44P01699 117 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 MYL2P10916 166 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 NEFHP12036 1026 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 IMPDH2P12268 514 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 DDX5P17844 614 aaKnown RBP9.83□□□□□ -0.84
BRCA1-213ENST00000476777 NPR2P20594 1047 aa9.83□□□□□ -0.84
BRCA1-213ENST00000476777 PAX7P23759 505 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms