RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 FAM71CQ8NEG0 241 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 ZNF563Q8TA94 476 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 PSMA8Q8TAA3 256 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 SFXN5Q8TD22 340 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 EPS8L3Q8TE67 593 aaKnown RBP10.42□□□□□ -0.74
HDAC6-219ENST00000476625 ST8SIA1Q92185 356 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 CNOT9Q92600 299 aaKnown RBP10.42□□□□□ -0.74
HDAC6-219ENST00000476625 MTERF3Q96E29 417 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 CCDC126Q96EE4 140 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 METTL2AQ96IZ6 378 aaKnown RBP10.42□□□□□ -0.74
HDAC6-219ENST00000476625 SLC35G5Q96KT7 338 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 SNX18Q96RF0 628 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 TXLNGYQ9BZA5 131 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 IQCGQ9H095 443 aaKnown RBP10.42□□□□□ -0.74
HDAC6-219ENST00000476625 SERINC1Q9NRX5 453 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 UPB1Q9UBR1 384 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 CHRNA9Q9UGM1 479 aa10.42□□□□□ -0.74
HDAC6-219ENST00000476625 RNF103-CHMP3A0A140T963 221 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 TCF21O43680 179 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 LILRA1O75019 489 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 LGI1O95970 557 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 OR12D1P0DN82 309 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 NEFHP12036 1026 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 PGCP20142 388 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 ALDH3A1P30838 453 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 IDH2P48735 452 aaKnown RBP10.41□□□□□ -0.74
HDAC6-219ENST00000476625 SLC16A1P53985 500 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 PGS1Q32NB8 556 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 ARHGAP11BQ3KRB8 267 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 XKR7Q5GH72 579 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 ANKRD46Q86W74 232 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 MEX3DQ86XN8 651 aaKnown RBP10.41□□□□□ -0.74
HDAC6-219ENST00000476625 ZIC4Q8N9L1 334 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 PIGXQ8TBF5 258 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 COQ8BQ96D53 544 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 PPP1R36Q96LQ0 422 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 DUSP26Q9BV47 211 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 NMUR2Q9GZQ4 415 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 ZNF350Q9GZX5 532 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 ADAM19Q9H013 955 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 TSPYL1Q9H0U9 437 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 FKRPQ9H9S5 495 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 AMDHD2Q9Y303 409 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 FKBP7Q9Y680 259 aa10.41□□□□□ -0.74
HDAC6-219ENST00000476625 A0A096LPE4 126 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 TMED7-TICAM2A0A0A6YYA0 188 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 A0A1W2PPZ6 126 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 LOC390937A0A1W2PQ73 354 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 ZNF503-AS2A6NEH8 195 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 STX11O75558 287 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 AKR7A3O95154 331 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 STAMBPO95630 424 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 OR4A8P0C604 315 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 G6PDP11413 515 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 HNF1AP20823 631 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 APEX1P27695 318 aaKnown RBP10.4□□□□□ -0.74
HDAC6-219ENST00000476625 CRHR1P34998 444 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 MAGEA8P43361 318 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 SNRPD2P62316 118 aaKnown RBP10.4□□□□□ -0.74
HDAC6-219ENST00000476625 H3F3AP84243 136 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 WHAMMP3Q1A5X7 153 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 FAM174BQ3ZCQ3 159 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 CCDC153Q494R4 210 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 OR7E24Q6IFN5 339 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 C12orf54Q6X4T0 127 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 FRRS1Q6ZNA5 592 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 RNF165Q6ZSG1 346 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 TRMT10CQ7L0Y3 403 aaKnown RBP10.4□□□□□ -0.74
HDAC6-219ENST00000476625 EIF3MQ7L2H7 374 aaKnown RBP10.4□□□□□ -0.74
HDAC6-219ENST00000476625 C16orf62Q7Z3J2 963 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 CARM1Q86X55 608 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 RIMKLAQ8IXN7 391 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 SVOPLQ8N434 492 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 TMEM99Q8N816 258 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 SLC25A43Q8WUT9 341 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-219ENST00000476625 TMEM234Q8WY98 164 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 ZHX1-C8orf76Q96EF9 292 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 AURKBQ96GD4 344 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-219ENST00000476625 ALKBH3Q96Q83 286 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-219ENST00000476625 NELFAQ9H3P2 528 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 TPK1Q9H3S4 243 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 NARFLQ9H6Q4 476 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 CA10Q9NS85 328 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 TMEM181Q9P2C4 612 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 SLC17A7Q9P2U7 560 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 DCTN4Q9UJW0 460 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 TMED5Q9Y3A6 229 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 TMED7Q9Y3B3 224 aa10.4□□□□□ -0.74
HDAC6-219ENST00000476625 SH3PXD2BA1X283 911 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 H3BQF6 201 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 COPEO14579 308 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SPRY1O43609 319 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-219ENST00000476625 CECR9P0C854 216 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 TACR3P29371 465 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SERPINF1P36955 418 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SRP14P37108 136 aaKnown RBP10.39□□□□□ -0.75
HDAC6-219ENST00000476625 APOBEC1P41238 236 aaKnown RBP10.39□□□□□ -0.75
HDAC6-219ENST00000476625 SELENOPP49908 381 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 PRPS1P60891 318 aa10.39□□□□□ -0.75
HDAC6-219ENST00000476625 HGFACQ04756 655 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms