RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 DHDDSQ86SQ9 333 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 VRK2Q86Y07 508 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 ADGRG3Q86Y34 549 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 SLC30A8Q8IWU4 369 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 CADM2Q8N3J6 435 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 HSD17B8Q92506 261 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 PIGTQ969N2 578 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 MBD6Q96DN6 1003 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 POTEKPQ9BYX7 375 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 SLC6A13Q9NSD5 602 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 CCM2LQ9NUG4 571 aaPredicted RBP9.09□□□□□ -0.95
CCM2-208ENST00000476594 PARPBPQ9NWS1 579 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 OSGIN1Q9UJX0 560 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 SLC9A8Q9Y2E8 581 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 PLEKHA6Q9Y2H5 1048 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 NOSIPQ9Y314 301 aaKnown RBP9.09□□□□□ -0.95
CCM2-208ENST00000476594 GMEB1Q9Y692 573 aa9.09□□□□□ -0.95
CCM2-208ENST00000476594 IGKV3D-15A0A087WSY6 115 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 A8MVM7 634 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 AP3D1O14617 1153 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 MRPL33O75394 65 aaKnown RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 VAMP5O95183 116 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 PGM3O95394 542 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 AHSA1O95433 338 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 ARAFP10398 606 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 CCNA2P20248 432 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 CDK6Q00534 326 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 RBBP4Q09028 425 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 SCARB2Q14108 478 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 RPS26P11Q5JNZ5 115 aaPredicted RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 SFRP5Q5T4F7 317 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 INTS11Q5TA45 600 aaKnown RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 PAQR6Q6TCH4 344 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 NUFIP2Q7Z417 695 aaKnown RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 ABHD12BQ7Z5M8 362 aaPredicted RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 CXorf67Q86X51 503 aaPredicted RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 WFDC8Q8IUA0 241 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 FUNDC1Q8IVP5 155 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 UBE2J2Q8N2K1 259 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 HIPK4Q8NE63 616 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 APH1AQ96BI3 265 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 MUCL1Q96DR8 90 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 SH3GL1Q99961 368 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 PIF1Q9H611 641 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 TMEM38AQ9H6F2 299 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 ESRP2Q9H6T0 727 aaKnown RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 MED4Q9NPJ6 270 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 BEX4Q9NWD9 120 aaPredicted RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 C6orf203Q9P0P8 240 aaPredicted RBP9.08□□□□□ -0.96
CCM2-208ENST00000476594 AKAP6Q13023 2319 aa9.08□□□□□ -0.96
CCM2-208ENST00000476594 TMEM72A0PK05 275 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 ELOA3DA6NLF2 546 aaPredicted RBP9.07□□□□□ -0.96
CCM2-208ENST00000476594 ARHGEF9O43307 516 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 TMCC2O75069 709 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 ADAP00813 363 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 GKN3PP0CG01 181 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 GPX2P18283 190 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 HOXC12P31275 282 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 ARFIP2P53365 341 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 SLC16A1P53985 500 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 NFYCQ13952 458 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 CAPRIN1Q14444 709 aaKnown RBP9.07□□□□□ -0.96
CCM2-208ENST00000476594 TESK1Q15569 626 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 CYP51A1Q16850 503 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 DEFB113Q30KQ7 82 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 ELOA3BQ3SY89 546 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 MMEL1Q495T6 779 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 PAGE3Q5JUK9 113 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 ANKRD34AQ69YU3 496 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 BHLHA15Q7RTS1 189 aaPredicted RBP9.07□□□□□ -0.96
CCM2-208ENST00000476594 RANBP3LQ86VV4 465 aaPredicted RBP9.07□□□□□ -0.96
CCM2-208ENST00000476594 P2RY8Q86VZ1 359 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 GABRG1Q8N1C3 465 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 DPP10Q8N608 796 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 C11orf65Q8NCR3 313 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 ELOA3Q8NG57 546 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 NFKBIDQ8NI38 313 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 STK35Q8TDR2 534 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 DNAJA4Q8WW22 397 aaPredicted RBP9.07□□□□□ -0.96
CCM2-208ENST00000476594 RASSF5Q8WWW0 418 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 NRGNQ92686 78 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 THOC1Q96FV9 657 aaKnown RBP9.07□□□□□ -0.96
CCM2-208ENST00000476594 ARL5BQ96KC2 179 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 SF3B5Q9BWJ5 86 aaKnown RBP9.07□□□□□ -0.96
CCM2-208ENST00000476594 TRIM2Q9C040 744 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 OR11A1Q9GZK7 315 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 ADAM19Q9H013 955 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 CXXC4Q9H2H0 198 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 PLEKHF2Q9H8W4 249 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 UBTD1Q9HAC8 227 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 C12orf10Q9HB07 376 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 RLIMQ9NVW2 624 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 SLC25A37Q9NYZ2 338 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 VAPAQ9P0L0 249 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 UPB1Q9UBR1 384 aa9.07□□□□□ -0.96
CCM2-208ENST00000476594 TESQ9UGI8 421 aaKnown RBP9.07□□□□□ -0.96
CCM2-208ENST00000476594 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.06□□□□□ -0.96
CCM2-208ENST00000476594 CIB4A0PJX0 185 aa9.06□□□□□ -0.96
CCM2-208ENST00000476594 OR6C65A6NJZ3 312 aa9.06□□□□□ -0.96
CCM2-208ENST00000476594 BBIP1A8MTZ0 92 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms