RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CCR1P32246 355 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 P2RY4P51582 365 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 PLK1P53350 603 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 RPL23AP62750 156 aaKnown RBP4.26□□□□□ -1.73
VPS50-212ENST00000476413 CDK16Q00536 496 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 NSUN5P1Q3KNT7 163 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 DMRTC1Q5HYR2 192 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 OR2A2Q6IF42 318 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 ZNF544Q6NX49 715 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 ZNF589Q86UQ0 364 aaPredicted RBP4.26□□□□□ -1.73
VPS50-212ENST00000476413 TRPV1Q8NER1 839 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 OR1L4Q8NGR5 311 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 FBXO32Q969P5 355 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 SERAC1Q96JX3 654 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 OXGR1Q96P68 337 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 PLEKHF1Q96S99 279 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 RNF2Q99496 336 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 NMUR2Q9GZQ4 415 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 PRR34Q9NV39 138 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 RLFQ13129 1914 aa4.26□□□□□ -1.73
VPS50-212ENST00000476413 A0A1B0GVL5 298 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 A0A1W2PPE3 182 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 ARHGEF35A5YM69 484 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 OR52A4PA6NMU1 304 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 ERI2A8K979 691 aaKnown RBP4.25□□□□□ -1.73
VPS50-212ENST00000476413 UBXN8O00124 270 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 TNFSF11O14788 317 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 POLR2DO15514 142 aaKnown RBP4.25□□□□□ -1.73
VPS50-212ENST00000476413 LGI1O95970 557 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 GNA11P29992 359 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 NTSP30990 170 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 DDOSTP39656 456 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 BTDP43251 543 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 HMGN5P82970 282 aaKnown RBP4.25□□□□□ -1.73
VPS50-212ENST00000476413 BST1Q10588 318 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 DUSP7Q16829 419 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 RNF212Q495C1 297 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 FAM220AQ7Z4H9 259 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 HSD17B13Q7Z5P4 300 aaPredicted RBP4.25□□□□□ -1.73
VPS50-212ENST00000476413 ZBED8Q8IZ13 594 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 OR52H1Q8NGJ2 320 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 MAIP1Q8WWC4 291 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 CNDP1Q96KN2 507 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 TRIM62Q9BVG3 475 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 AZI2Q9H6S1 392 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 METTL7AQ9H8H3 244 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 DCDC2Q9UHG0 476 aa4.25□□□□□ -1.73
VPS50-212ENST00000476413 IGLV3-10A0A075B6K4 115 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 A0A0U1RQS6 177 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 XKRY2A2RUG3 117 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 HELTA6NFD8 242 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 PCP4L1A6NKN8 68 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 E7ENQ6 273 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 CLDN9O95484 217 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 GAPDHP04406 335 aaKnown RBP4.24□□□□□ -1.73
VPS50-212ENST00000476413 KLK2P20151 261 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 PSMB1P20618 241 aaKnown RBP4.24□□□□□ -1.73
VPS50-212ENST00000476413 OPRD1P41143 372 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 RPS8P62241 208 aaKnown RBP4.24□□□□□ -1.73
VPS50-212ENST00000476413 ZYG11AQ6WRX3 759 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 ALLCQ8N6M5 410 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 FAM83FQ8NEG4 500 aaPredicted RBP4.24□□□□□ -1.73
VPS50-212ENST00000476413 ST8SIA1Q92185 356 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 CNPY3Q9BT09 278 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 REEP4Q9H6H4 257 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 STAP1Q9ULZ2 295 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 SMAD5-AS1Q9Y6J3 95 aa4.24□□□□□ -1.73
VPS50-212ENST00000476413 FAM240BA0A1B0GVZ2 78 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 TCRBV9S1A1TA0A576 114 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 BTBD17A6NE02 478 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 HSD17B6O14756 317 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 MED7O43513 233 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 CCDC130P13994 396 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 CALCRP30988 508 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 SULT1E1P49888 294 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 ACTR3P61158 418 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 ZNF45Q02386 682 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 ARL6IP1Q15041 203 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 KLHL38Q2WGJ6 581 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 FILIP1LQ4L180 1135 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 C6orf226Q5I0X4 101 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 CTSL3PQ5NE16 218 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 ENPP6Q6UWR7 440 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 ARCQ7LC44 396 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 PRSS41Q7RTY9 318 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 OR52I1Q8NGK6 324 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 RNF139Q8WU17 664 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 OR1E3Q8WZA6 343 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 CNOT6LQ96LI5 555 aaKnown RBP4.23□□□□□ -1.73
VPS50-212ENST00000476413 C12orf42Q96LP6 360 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 SMIM14Q96QK8 99 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 KCNA7Q96RP8 456 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 SLC39A3Q9BRY0 314 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 SUDS3Q9H7L9 328 aaPredicted RBP4.23□□□□□ -1.73
VPS50-212ENST00000476413 PTGES2Q9H7Z7 377 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 NHEJ1Q9H9Q4 299 aaPredicted RBP4.23□□□□□ -1.73
VPS50-212ENST00000476413 MARCH5Q9NX47 278 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 SEC14L3Q9UDX4 400 aa4.23□□□□□ -1.73
VPS50-212ENST00000476413 KIF25Q9UIL4 384 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms