RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 SF3B4Q15427 424 aaKnown RBP eCLIP13.65□□□□□ -0.227e-6■■■■□ 19.9
MCF2L-224ENST00000475524 FGD3Q5JSP0 725 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 ZNF730Q6ZMV8 503 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 RRM2BQ7LG56 351 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 GGNQ86UU5 652 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 NKAIN4Q8IVV8 208 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 PQLC1Q8N2U9 271 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 SVOPLQ8N434 492 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 MEIOBQ8N635 442 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 LIPHQ8WWY8 451 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 ASF1BQ9NVP2 202 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 SPRR3Q9UBC9 169 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 RHCGQ9UBD6 479 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 LAMA5O15230 3695 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 KIAA1549Q9HCM3 1950 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 EPG5Q9HCE0 2579 aa13.65□□□□□ -0.22
MCF2L-224ENST00000475524 MGRN1O60291 552 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 WISP1O95388 367 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 IL11P20809 199 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 IDUAP35475 653 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 RPS3AP61247 264 aaKnown RBP13.64□□□□□ -0.23
MCF2L-224ENST00000475524 CSNK2A1P68400 391 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-224ENST00000475524 PRKCDQ05655 676 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 RBPJQ06330 500 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 FAM69AQ5T7M9 428 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 C1orf140Q5VVS0 124 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 PODNL1Q6PEZ8 512 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 SHQ1Q6PI26 577 aaKnown RBP13.64□□□□□ -0.23
MCF2L-224ENST00000475524 HIPK1Q86Z02 1210 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 ST6GALNAC3Q8NDV1 305 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 OR5M1Q8NGP8 315 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 OR5K1Q8NHB7 308 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 MFSD8Q8NHS3 518 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 RNF217Q8TC41 542 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 CPT1CQ8TCG5 803 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 TMEM255BQ8WV15 326 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 LRTOMTQ8WZ04 291 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 MIB2Q96AX9 1013 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 ADGRG7Q96K78 797 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 TIMP4Q99727 224 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 TSPAN10Q9H1Z9 355 aaPredicted RBP13.64□□□□□ -0.23
MCF2L-224ENST00000475524 NTN4Q9HB63 628 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 TIGARQ9NQ88 270 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 STX18Q9P2W9 335 aaKnown RBP13.64□□□□□ -0.23
MCF2L-224ENST00000475524 ZNF407Q9C0G0 2248 aa13.64□□□□□ -0.23
MCF2L-224ENST00000475524 DNAJC13O75165 2243 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 TRBV4-1A0A0J9YWV2 114 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 A0A1B0GTH9 108 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 E2F6O75461 281 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 HOXD4P09016 255 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-224ENST00000475524 TCEA1P23193 301 aaKnown RBP13.63□□□□□ -0.23
MCF2L-224ENST00000475524 PTGS2P35354 604 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 PTGER4P35408 488 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 UGT2B15P54855 530 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 RAC3P60763 192 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 MICAQ29983 383 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 EXOC3L2Q2M3D2 409 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 CTU2Q2VPK5 515 aaKnown RBP13.63□□□□□ -0.23
MCF2L-224ENST00000475524 TMEM176BQ3YBM2 270 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-224ENST00000475524 ANKDD1AQ495B1 522 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 WLSQ5T9L3 541 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 HMBOX1Q6NT76 420 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 POMZP3Q6PJE2 187 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 TMPPEQ6ZT21 453 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 TMPRSS11FQ6ZWK6 438 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 CHERPQ8IWX8 916 aaKnown RBP13.63□□□□□ -0.23
MCF2L-224ENST00000475524 CDK20Q8IZL9 346 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 OR4K5Q8NGD3 323 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 OR2V1Q8NHB1 315 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 PIGXQ8TBF5 258 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 ZPLD1Q8TCW7 415 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 DNAJC9Q8WXX5 260 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 WDYHV1Q96HA8 205 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 PKP2Q99959 881 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 PTDSS2Q9BVG9 487 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 COQ10BQ9H8M1 238 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 FKRPQ9H9S5 495 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 MEPEQ9NQ76 525 aaPredicted RBP13.63□□□□□ -0.23
MCF2L-224ENST00000475524 VNN3Q9NY84 501 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 CORINQ9Y5Q5 1042 aa13.63□□□□□ -0.23
MCF2L-224ENST00000475524 COL6A6A6NMZ7 2263 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 A0A0J9YW62 118 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 ZC3H12DA2A288 527 aaKnown RBP13.62□□□□□ -0.23
MCF2L-224ENST00000475524 AHRRA9YTQ3 701 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 FTCDNL1E5RQL4 147 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 EIF1BO60739 113 aaKnown RBP13.62□□□□□ -0.23
MCF2L-224ENST00000475524 CCNB2O95067 398 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 TFPIP10646 304 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 GABRA1P14867 456 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 SFTPDP35247 375 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 SLC9A3P48764 834 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 SLC35A1P78382 337 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 MYBPHQ13203 477 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 RCN1Q15293 331 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 SEC23BQ15437 767 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 ZNF239Q16600 458 aaKnown RBP13.62□□□□□ -0.23
MCF2L-224ENST00000475524 PRR30Q53SZ7 412 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-224ENST00000475524 ZNF770Q6IQ21 691 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-224ENST00000475524 C1orf94Q6P1W5 598 aa13.62□□□□□ -0.23
MCF2L-224ENST00000475524 Q6ZPB1 254 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms