RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ZNF559Q9BR84 538 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF426Q9BUY5 554 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 SRXN1Q9BYN0 137 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 AMBRA1Q9C0C7 1298 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 EXO5Q9H790 373 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 MAN2C1Q9NTJ4 1040 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ACTR3BQ9P1U1 418 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 CLCF1Q9UBD9 225 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 A4GNTQ9UNA3 340 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 SH3GLB1Q9Y371 365 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 TMED7Q9Y3B3 224 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 AP4B1Q9Y6B7 739 aa6.27□□□□□ -1.41
LIMD1-204ENST00000474665 ATRQ13535 2644 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 A0A1W2PNR3 127 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 FAM221AA4D161 298 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF814B7Z6K7 855 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 LINC01387J3KSC0 135 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 J3KTA2 159 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 EBAG9O00559 213 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 TNFSF11O14788 317 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 BCKDKO14874 412 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 SEC14L5O43304 696 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ATP5HO75947 161 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 AQP8O94778 261 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF682O95780 498 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 TGM6O95932 706 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 IFNA14P01570 189 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 TPOP07202 933 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 GLI4P10075 376 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 IMPDH2P12268 514 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ABOP16442 354 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 CCNA2P20248 432 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 PTNP21246 168 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ACVR2AP27037 513 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 SFTPDP35247 375 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 APOBEC1P41238 236 aaKnown RBP6.26□□□□□ -1.41
LIMD1-204ENST00000474665 POLR2HP52434 150 aaKnown RBP6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ADORA2A-AS1P86434 159 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 VLDLRP98155 873 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 MYBPHQ13203 477 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 PIN1Q13526 163 aaPredicted RBP6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ACSF3Q4G176 576 aaPredicted RBP6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ENTPD8Q5MY95 495 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF585AQ6P3V2 769 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 AAGABQ6PD74 315 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 POMZP3Q6PJE2 187 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 RPTNQ6XPR3 784 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 DEF8Q6ZN54 512 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 FJX1Q86VR8 437 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 P3H2Q8IVL5 708 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 UBQLNLQ8IYU4 475 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 EID3Q8N140 333 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 NAXEQ8NCW5 288 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ATP6V1C2Q8NEY4 427 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 TNIP2Q8NFZ5 429 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 OR10D3Q8NH80 312 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ZNF563Q8TA94 476 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ZPLD1Q8TCW7 415 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 SLC26A7Q8TE54 656 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ADAMTS16Q8TE57 1224 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 TMEM234Q8WY98 164 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 SMPDL3BQ92485 455 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 PROX1Q92786 737 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 SLC38A4Q969I6 547 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 FAM162AQ96A26 154 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ASB9Q96DX5 294 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 DNAJA3Q96EY1 480 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 NSMCE2Q96MF7 247 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 UCN2Q96RP3 112 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 MCHR1Q99705 422 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 SMR3AQ99954 134 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 PTDSS2Q9BVG9 487 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 TRIM2Q9C040 744 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ARMC7Q9H6L4 198 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 NDUFAF4Q9P032 175 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 TESQ9UGI8 421 aaKnown RBP6.26□□□□□ -1.41
LIMD1-204ENST00000474665 CHRNA9Q9UGM1 479 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 MAGEL2Q9UJ55 1249 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 SH3BGRL2Q9UJC5 107 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 ING1Q9UK53 422 aaPredicted RBP6.26□□□□□ -1.41
LIMD1-204ENST00000474665 BAG5Q9UL15 447 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 CAMK2AQ9UQM7 478 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 POMPQ9Y244 141 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 MEMO1Q9Y316 297 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 KLF2Q9Y5W3 355 aaPredicted RBP6.26□□□□□ -1.41
LIMD1-204ENST00000474665 V9GYQ6 96 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 STAB1Q9NY15 2570 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 HCFC1P51610 2035 aa6.26□□□□□ -1.41
LIMD1-204ENST00000474665 PRRC2AP48634 2157 aaKnown RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 HRNRQ86YZ3 2850 aaPredicted RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 JMJD1CQ15652 2540 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 COL6A5A8TX70 2615 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 A0A087WUJ7 227 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 TRGV8A0A0C4DH27 118 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 CD8B2A6NJW9 211 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 CPSF4LA6NMK7 179 aaKnown RBP6.25□□□□□ -1.41
LIMD1-204ENST00000474665 CLCA1A8K7I4 914 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 AHRRA9YTQ3 701 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 FAM47E-STBD1D6RA91 191 aa6.25□□□□□ -1.41
LIMD1-204ENST00000474665 FTCDNL1E5RQL4 147 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms