RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 FCMRO60667 390 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 SKAP2O75563 359 aaPredicted RBP12.27□□□□□ -0.45
CCDC78-209ENST00000474647 UGT2B17O75795 530 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 PMS2P2O95744 297 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 CCNA2P20248 432 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 HNF1AP20823 631 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 MAGEA8P43361 318 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 PDLIM4P50479 330 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 OR2B6P58173 313 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 HBA1P69905 142 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 PDK3Q15120 406 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 ZNF141Q15928 474 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 PGS1Q32NB8 556 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 FAM120AOSQ5T036 256 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 IL23RQ5VWK5 629 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 EIF3MQ7L2H7 374 aaKnown RBP12.27□□□□□ -0.45
CCDC78-209ENST00000474647 CCDC103Q8IW40 242 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 TCP10LQ8TDR4 215 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 DUSP26Q9BV47 211 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 OR11A1Q9GZK7 315 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 SERHL2Q9H4I8 314 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 ACER3Q9NUN7 267 aa12.27□□□□□ -0.45
CCDC78-209ENST00000474647 RNF103-CHMP3A0A140T963 221 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 SLC35F4A4IF30 521 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 DUXAA6NLW8 204 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 TM9SF1O15321 606 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 LYPLA1O75608 230 aaPredicted RBP12.26□□□□□ -0.45
CCDC78-209ENST00000474647 AK1P00568 194 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 APEHP13798 732 aaKnown RBP12.26□□□□□ -0.45
CCDC78-209ENST00000474647 APOBEC3AP31941 199 aaPredicted RBP12.26□□□□□ -0.45
CCDC78-209ENST00000474647 NTF4P34130 210 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 APOBEC1P41238 236 aaKnown RBP12.26□□□□□ -0.45
CCDC78-209ENST00000474647 SLC18A1P54219 525 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 PHC1P78364 1004 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 SLC25A3Q00325 362 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 UGT3A2Q3SY77 523 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 HSP90B2PQ58FF3 399 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 KLHL24Q6TFL4 600 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 C6orf120Q7Z4R8 191 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 HMGN2P46Q86SG4 172 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 CLECL1Q8IZS7 167 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 NATD1Q8N6N6 113 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 MUS81Q96NY9 551 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 MECRQ9BV79 373 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 CCDC106Q9BWC9 280 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 BHLHE41Q9C0J9 482 aaPredicted RBP12.26□□□□□ -0.45
CCDC78-209ENST00000474647 OR51I1Q9H343 314 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 EML4Q9HC35 981 aaKnown RBP12.26□□□□□ -0.45
CCDC78-209ENST00000474647 SLC17A7Q9P2U7 560 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 AMDHD2Q9Y303 409 aa12.26□□□□□ -0.45
CCDC78-209ENST00000474647 TMEM120BA0PK00 339 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 ANKRD28O15084 1053 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 KIAA0513O60268 411 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 DNAJA2O60884 412 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 BCAS1O75363 584 aaPredicted RBP12.25□□□□□ -0.45
CCDC78-209ENST00000474647 FGF4P08620 206 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 CDH2P19022 906 aaPredicted RBP12.25□□□□□ -0.45
CCDC78-209ENST00000474647 PRPS1L1P21108 318 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 ALDH3A1P30838 453 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 PGM1P36871 562 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 ETV4P43268 484 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 SLC16A1P53985 500 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 MAPK14Q16539 360 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 ARHGAP11BQ3KRB8 267 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 IQCCQ4KMZ1 466 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 XKR7Q5GH72 579 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 ZCCHC23Q6ZST2 131 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 GRINAQ7Z429 371 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 WDR31Q8NA23 367 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 COQ8BQ96D53 544 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 MSI2Q96DH6 328 aaKnown RBP12.25□□□□□ -0.45
CCDC78-209ENST00000474647 C3orf30Q96M34 536 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 SORCS2Q96PQ0 1159 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 VRK1Q99986 396 aaPredicted RBP12.25□□□□□ -0.45
CCDC78-209ENST00000474647 PRR14Q9BWN1 585 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 ZNF350Q9GZX5 532 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 KCNK9Q9NPC2 374 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 SLC17A5Q9NRA2 495 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 SLC7A10Q9NS82 523 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 EXD2Q9NVH0 621 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 MOKQ9UQ07 419 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 SLC35A3Q9Y2D2 325 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 SLC9A8Q9Y2E8 581 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 HDGFL3Q9Y3E1 203 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 WDR45Q9Y484 360 aa12.25□□□□□ -0.45
CCDC78-209ENST00000474647 NPHS1O60500 1241 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 THBS2P35442 1172 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 NR4A2P43354 598 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 SNRPD2P62316 118 aaKnown RBP12.24□□□□□ -0.45
CCDC78-209ENST00000474647 MPP2Q14168 576 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 C6orf136Q5SQH8 315 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 ATAD3BQ5T9A4 648 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 OR4F3Q6IEY1 312 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 TYW3Q6IPR3 259 aaKnown RBP12.24□□□□□ -0.45
CCDC78-209ENST00000474647 TNFAIP8L2Q6P589 184 aaPredicted RBP12.24□□□□□ -0.45
CCDC78-209ENST00000474647 SLC46A3Q7Z3Q1 461 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 HOMEZQ8IX15 550 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 C17orf78Q8N4C9 275 aa12.24□□□□□ -0.45
CCDC78-209ENST00000474647 ANKS4BQ8N8V4 417 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms