RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 KLF4O43474 513 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 RAMP1O60894 148 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 ADAP00813 363 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 ARAFP10398 606 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 PRG2P13727 222 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 CD53P19397 219 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 FKBP2P26885 142 aaKnown RBP15.9■□□□□ 0.14
UPF3A-203ENST00000474056 OR2B6P58173 313 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 IRX1P78414 480 aaPredicted RBP15.9■□□□□ 0.14
UPF3A-203ENST00000474056 DEFB113Q30KQ7 82 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 ZNF311Q5JNZ3 666 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 SFRP5Q5T4F7 317 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 GCNT6Q5T4J0 391 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 PRAMEF8Q5VWM4 474 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 PRAMEF7Q5VXH5 474 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 SERPINA11Q86U17 422 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 WFDC8Q8IUA0 241 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 CCDC103Q8IW40 242 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 CADM2Q8N3J6 435 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 NFKBIDQ8NI38 313 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 ZHX1-C8orf76Q96EF9 292 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 SPATA9Q9BWV2 254 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 TMEM181Q9P2C4 612 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 IFT52Q9Y366 437 aa15.9■□□□□ 0.14
UPF3A-203ENST00000474056 IGKV3D-15A0A087WSY6 115 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 A0A1W2PP18 115 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 C5orf58C9J3I9 102 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 FRS3O43559 492 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 DNPH1O43598 174 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 PGM3O95394 542 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 PPIBP23284 216 aaKnown RBP15.89■□□□□ 0.13
UPF3A-203ENST00000474056 BNIP2Q12982 314 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 PDK3Q15120 406 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 BEX5Q5H9J7 111 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 WBP2NLQ6ICG8 309 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 GALNT5Q7Z7M9 940 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 STEAP2Q8NFT2 490 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 PIGXQ8TBF5 258 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 RSPO3Q9BXY4 272 aaPredicted RBP15.89■□□□□ 0.13
UPF3A-203ENST00000474056 RABEP2Q9H5N1 569 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 UBTD1Q9HAC8 227 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 CACYBPQ9HB71 228 aaKnown RBP15.89■□□□□ 0.13
UPF3A-203ENST00000474056 ZNF446Q9NWS9 450 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 ZNF232Q9UNY5 417 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 TRAPPC4Q9Y296 219 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 GMEB1Q9Y692 573 aa15.89■□□□□ 0.13
UPF3A-203ENST00000474056 A0A0G2JND7 137 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 IL32P24001 234 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 CXCR1P25024 350 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 COPZ1P61923 177 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 HOXC5Q00444 222 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 ZSWIM7Q19AV6 140 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 ALKBH2Q6NS38 261 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 DLEU7Q6UYE1 221 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 Q6ZT83 130 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 KISS1RQ969F8 398 aaPredicted RBP15.88■□□□□ 0.13
UPF3A-203ENST00000474056 C3orf49Q96BT1 292 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 CPPED1Q9BRF8 314 aaPredicted RBP15.88■□□□□ 0.13
UPF3A-203ENST00000474056 HDHD5Q9BXW7 423 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 EMC3Q9P0I2 261 aa15.88■□□□□ 0.13
UPF3A-203ENST00000474056 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.88■□□□□ 0.13
UPF3A-203ENST00000474056 LEF1Q9UJU2 399 aaPredicted RBP15.88■□□□□ 0.13
UPF3A-203ENST00000474056 NOSIPQ9Y314 301 aaKnown RBP15.88■□□□□ 0.13
UPF3A-203ENST00000474056 ACANP16112 2415 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 LYZL6O75951 148 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 GPX2P18283 190 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 FPR1P21462 350 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 NTF4P34130 210 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 MAP2K6P52564 334 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 SLC16A1P53985 500 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 SLC35A1P78382 337 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 H3F3AP84243 136 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 CDK6Q00534 326 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 ITGADQ13349 1161 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 TAB1Q15750 504 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 BHLHA15Q7RTS1 189 aaPredicted RBP15.87■□□□□ 0.13
UPF3A-203ENST00000474056 DHDDSQ86SQ9 333 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 RETREG3Q86VR2 466 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 ZNF100Q8IYN0 542 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 PLPPR2Q96GM1 343 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 SIKE1Q9BRV8 207 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 ARMC7Q9H6L4 198 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 TRIM33Q9UPN9 1127 aa15.87■□□□□ 0.13
UPF3A-203ENST00000474056 HEATR1Q9H583 2144 aaKnown RBP15.86■□□□□ 0.13
UPF3A-203ENST00000474056 PLAUP00749 431 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 IGHV3-9P01782 118 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 ETS2P15036 469 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 IGHV1-2P23083 117 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 IDUAP35475 653 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 CEACAM7Q14002 265 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 SCARB2Q14108 478 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 P2RY6Q15077 328 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 ACKR1Q16570 336 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 RUNDC3AQ59EK9 446 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 REEP3Q6NUK4 255 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 COMTD1Q86VU5 262 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 TGIF2LYQ8IUE0 185 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 TMEM120AQ9BXJ8 343 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 POTEKPQ9BYX7 375 aa15.86■□□□□ 0.13
UPF3A-203ENST00000474056 TMEM38AQ9H6F2 299 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms